Strain Fitness in Pseudomonas simiae WCS417 around PS417_08550

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,866,930	-				-1.1
1,866,930	-				-0.4
1,866,980	-				-0.5
1,867,012	-				-1.3
1,867,089	+		PS417_08545	0.12	+0.3
1,867,410	+		PS417_08545	0.54	+1.8
1,867,411	-		PS417_08545	0.54	-1.8
1,867,765	+				+0.5
1,867,765	+				+0.2
1,867,765	+				+0.1
1,867,766	-				+2.0
1,867,766	-				+0.1
1,867,766	-				-0.1
1,867,766	-				+0.1
1,867,825	-				+0.9
1,867,942	-		PS417_08550	0.11	+1.3
1,868,227	+		PS417_08550	0.54	-0.2
1,868,227	+		PS417_08550	0.54	+0.2
1,868,227	+		PS417_08550	0.54	+0.6
1,868,227	+		PS417_08550	0.54	+0.3
1,868,227	+		PS417_08550	0.54	+0.9
1,868,227	+		PS417_08550	0.54	-1.8
1,868,227	+		PS417_08550	0.54	+0.9
1,868,227	+		PS417_08550	0.54	+1.2
1,868,227	+		PS417_08550	0.54	-0.5
1,868,228	-		PS417_08550	0.55	+0.8
1,868,228	-		PS417_08550	0.55	-0.5
1,868,228	-		PS417_08550	0.55	+0.6
1,868,228	-		PS417_08550	0.55	+0.7
1,868,228	-		PS417_08550	0.55	-0.1
1,868,230	-		PS417_08550	0.55	+0.3
1,868,230	-		PS417_08550	0.55	+0.4
1,868,230	-		PS417_08550	0.55	-0.9
1,868,230	-		PS417_08550	0.55	-2.2
1,869,494	-				-0.6
1,869,494	-				-0.2
1,869,518	-				-1.5
1,869,518	-				-0.0
1,869,518	-				-1.7
1,869,518	-				+2.2
1,869,518	-				-2.0
1,869,520	-				-3.9
1,869,520	-				-2.5
1,869,520	-				+0.6
1,869,520	-				-1.8
1,869,520	-				-0.4