Strain Fitness in Pseudomonas simiae WCS417 around PS417_08285

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,811,836	+		PS417_08275	0.72	-0.6
1,811,836	+		PS417_08275	0.72	+0.6
1,811,837	-		PS417_08275	0.72	-0.6
1,812,064	+		PS417_08275	0.88	+0.1
1,812,064	+		PS417_08275	0.88	-1.7
1,812,064	+				+1.2
1,812,065	-		PS417_08275	0.88	+0.1
1,812,128	-				+0.0
1,812,142	+				-2.1
1,812,142	+				+0.1
1,812,298	-				+0.4
1,812,298	-				-0.4
1,812,330	+				+0.0
1,812,474	+				-1.1
1,812,644	+				+0.6
1,812,644	+				+1.6
1,812,645	-				-2.6
1,812,668	-				+0.7
1,812,703	+				+1.3
1,812,703	+				-0.1
1,812,724	+				-0.8
1,812,724	+				-0.7
1,812,725	-				-0.6
1,812,725	-				-0.6
1,812,793	+				+1.8
1,812,793	+				-1.4
1,812,794	-				-0.2
1,812,794	-				-0.0
1,812,794	-				-2.9
1,812,796	+				+0.1
1,812,797	-				+1.2
1,812,910	+		PS417_08285	0.12	-0.2
1,812,911	-				+0.2
1,812,982	+		PS417_08285	0.16	-1.1
1,812,983	-		PS417_08285	0.16	+0.0
1,813,103	-		PS417_08285	0.23	+0.6
1,813,233	+		PS417_08285	0.31	+1.1
1,813,234	-		PS417_08285	0.31	-0.4
1,813,327	+		PS417_08285	0.36	+0.9
1,813,327	+		PS417_08285	0.36	+0.7
1,813,327	+		PS417_08285	0.36	+0.4
1,813,328	-		PS417_08285	0.36	+0.3
1,813,328	-		PS417_08285	0.36	-1.9
1,813,544	-		PS417_08285	0.49	+1.8
1,813,634	-		PS417_08285	0.54	+1.6
1,813,863	+		PS417_08285	0.68	+1.1
1,813,867	+		PS417_08285	0.68	+1.1
1,813,867	+		PS417_08285	0.68	-0.2
1,813,867	+		PS417_08285	0.68	+0.5
1,813,867	+		PS417_08285	0.68	+1.4
1,813,867	+		PS417_08285	0.68	+1.3
1,813,868	-		PS417_08285	0.68	+0.8
1,813,868	-		PS417_08285	0.68	-0.0
1,813,936	+		PS417_08285	0.72	+1.5
1,814,098	+		PS417_08285	0.82	+1.3
1,814,098	+		PS417_08285	0.82	+1.8
1,814,098	+		PS417_08285	0.82	-0.3
1,814,099	-		PS417_08285	0.82	-0.2
1,814,099	-		PS417_08285	0.82	-1.6
1,814,104	+		PS417_08285	0.82	+0.7
1,814,190	+		PS417_08285	0.87	+1.2
1,814,213	-		PS417_08285	0.88	+0.2
1,814,428	-				-0.6
1,814,632	+		PS417_08290	0.10	+2.6
1,814,632	+		PS417_08290	0.10	-1.8
1,814,633	-		PS417_08290	0.10	-1.5
1,814,633	-		PS417_08290	0.10	-1.2
1,814,633	-		PS417_08290	0.10	-0.1
1,814,633	-		PS417_08290	0.10	-0.7
1,814,633	-		PS417_08290	0.10	+2.1
1,814,633	-		PS417_08290	0.10	-0.7
1,814,828	+		PS417_08290	0.20	-0.8
1,814,828	+		PS417_08290	0.20	+0.6
1,814,829	-		PS417_08290	0.20	+0.0
1,814,829	-		PS417_08290	0.20	-0.1
1,814,829	-		PS417_08290	0.20	+0.1
1,814,829	-		PS417_08290	0.20	+2.3
1,815,229	-		PS417_08290	0.39	-0.1