Strain Fitness in Pseudomonas simiae WCS417 around PS417_08150

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,786,097	+				-0.4
1,786,098	-				+2.2
1,786,099	+				-1.5
1,786,099	+				+1.0
1,786,100	-				+0.0
1,786,100	-				-1.7
1,786,100	-				+0.2
1,786,120	+				-0.5
1,786,121	-				+0.8
1,786,122	+				-0.3
1,786,123	-				+1.6
1,786,162	+				+0.7
1,786,185	-				+1.2
1,786,189	+				+2.5
1,786,189	+				+1.6
1,786,190	-				+0.2
1,786,348	-		PS417_08150	0.61	+0.8
1,786,396	-		PS417_08150	0.78	+2.9
1,786,396	-		PS417_08150	0.78	-0.8
1,786,426	+		PS417_08150	0.89	+1.4
1,786,451	+				+1.2
1,786,452	-				+2.1
1,786,472	+				-2.7
1,786,474	+				+1.4
1,786,474	+				+0.1
1,786,474	+				+0.4
1,786,474	+				+0.0
1,786,501	-				+4.7
1,786,540	+				+4.2
1,786,664	+		PS417_08155	0.25	+4.7
1,786,673	+		PS417_08155	0.28	+6.9
1,786,674	-		PS417_08155	0.28	+8.6
1,786,906	+				+2.7
1,786,938	+		PS417_08160	0.13	+0.6
1,786,939	-		PS417_08160	0.14	+3.2
1,786,939	-		PS417_08160	0.14	+2.8
1,787,055	+		PS417_08160	0.64	+1.1
1,787,142	+				+2.3
1,787,142	+				+0.6
1,787,143	-				+3.3
1,787,143	-				+3.3
1,787,143	-				+3.0
1,787,163	-				+2.7
1,787,167	+				+0.7
1,787,168	-				+5.1
1,787,191	+				+0.8
1,787,192	-				+1.2
1,787,192	-				+2.2
1,787,208	+				+2.5
1,787,208	+				+0.6
1,787,219	-				+3.4
1,787,219	-				+2.8
1,787,259	-				+3.4
1,787,263	+				+0.7
1,787,287	-				+2.9
1,787,435	-				+4.6