Strain Fitness in Pseudomonas simiae WCS417 around PS417_07555

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,662,121	-		PS417_07550	0.70	+1.1
1,662,264	+		PS417_07550	0.77	+1.0
1,662,264	+		PS417_07550	0.77	+1.4
1,662,346	-		PS417_07550	0.82	-0.2
1,662,502	-		PS417_07550	0.90	+0.7
1,662,502	-		PS417_07550	0.90	-1.1
1,662,510	+				+1.0
1,662,510	+				-0.3
1,662,510	+				+2.6
1,662,511	-				-1.0
1,662,547	-				-0.7
1,662,555	+				-1.2
1,662,555	+				+0.5
1,662,556	-				+0.5
1,662,556	-				+0.4
1,662,556	-				-1.3
1,662,600	+				-1.7
1,662,600	+				+0.1
1,662,603	+				-0.8
1,662,728	+				-0.7
1,662,729	-				-1.7
1,662,760	-				-0.6
1,662,760	-				+0.5
1,662,875	-				-0.4
1,662,875	-				+0.4
1,662,883	+				+2.0
1,662,913	+				+0.3
1,662,914	-				-0.9
1,663,092	+				-1.3
1,663,215	-		PS417_07555	0.16	+1.5
1,663,633	-		PS417_07555	0.37	+0.6
1,663,758	+		PS417_07555	0.44	+0.8
1,663,758	+		PS417_07555	0.44	+1.0
1,663,758	+		PS417_07555	0.44	+0.9
1,663,758	+		PS417_07555	0.44	+0.2
1,663,759	-		PS417_07555	0.44	-1.9
1,664,169	+		PS417_07555	0.65	+0.6
1,664,174	+		PS417_07555	0.66	+2.5
1,664,174	+		PS417_07555	0.66	+1.4
1,664,175	-		PS417_07555	0.66	-0.8
1,664,175	-		PS417_07555	0.66	+0.8
1,664,175	-		PS417_07555	0.66	+0.2
1,664,212	+		PS417_07555	0.68	+0.7
1,664,212	+		PS417_07555	0.68	+0.1
1,664,212	+		PS417_07555	0.68	-0.3
1,664,462	+				-0.3
1,664,462	+		PS417_07555	0.81	+1.3
1,664,463	-		PS417_07555	0.81	+0.3
1,664,584	+		PS417_07555	0.87	+0.5
1,664,631	-		PS417_07555	0.89	-2.2
1,664,700	+				-1.7
1,664,700	+				+1.0
1,664,846	+				+0.1
1,664,849	+				-0.5
1,664,889	+				-0.0
1,664,898	+				-0.7
1,664,898	+				+0.4
1,664,898	+				+0.5
1,664,899	-				+0.7
1,664,916	+				-0.1
1,664,916	+				+0.3
1,664,917	-				-1.8
1,664,969	+		PS417_07560	0.12	-1.5
1,664,970	-				+0.7
1,664,970	-		PS417_07560	0.12	-1.0
1,665,091	-		PS417_07560	0.40	+0.2
1,665,341	-				-1.3
1,665,381	+				+0.2
1,665,381	+				+4.3
1,665,382	-				+3.0
1,665,382	-				-1.0
1,665,455	-				-3.4
1,665,460	+				-0.3
1,665,460	+				-1.0
1,665,460	+				+0.9
1,665,460	+				+1.2
1,665,460	+				-0.1
1,665,461	-				-1.9
1,665,461	-				-4.5
1,665,461	-				-3.7
1,665,461	-				-1.5
1,665,461	-				-0.7
1,665,794	+		PS417_07565	0.76	-3.3
1,665,831	-		PS417_07565	0.84	-0.8
1,665,831	-		PS417_07565	0.84	-1.0
1,665,831	-		PS417_07565	0.84	-2.2
1,665,831	-		PS417_07565	0.84	-2.4