Strain Fitness in Pseudomonas simiae WCS417 around PS417_07200

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,588,389	+				-0.7
1,588,389	+				+1.5
1,588,389	+				-0.1
1,588,389	+				+1.0
1,588,390	-				+0.4
1,588,390	-				-1.0
1,588,390	-				+0.4
1,588,486	-				-1.6
1,588,486	-				-1.0
1,588,498	+				+3.9
1,588,541	+				-1.8
1,588,541	+				-0.1
1,588,541	+				+0.3
1,588,542	-				+1.4
1,588,624	+				-0.0
1,588,657	+				-0.6
1,588,660	+				+0.3
1,588,660	+				+1.0
1,588,748	+		PS417_07195	0.13	-1.9
1,588,748	+		PS417_07195	0.13	+0.0
1,588,749	-		PS417_07195	0.14	+0.5
1,588,900	+		PS417_07195	0.73	-0.2
1,588,900	+		PS417_07195	0.73	+1.9
1,588,901	-		PS417_07195	0.73	+0.6
1,588,901	-		PS417_07195	0.73	-0.6
1,588,970	+				-0.5
1,589,031	-				-2.1
1,589,078	+				+0.8
1,589,124	+		PS417_07200	0.11	+0.8
1,589,124	+		PS417_07200	0.11	+0.4
1,589,124	+		PS417_07200	0.11	+0.2
1,589,125	-		PS417_07200	0.11	-1.0
1,589,125	-		PS417_07200	0.11	+0.2
1,589,125	-		PS417_07200	0.11	-1.3
1,589,125	-		PS417_07200	0.11	+0.3
1,589,614	+		PS417_07200	0.62	-1.5
1,589,615	-		PS417_07200	0.62	-0.5
1,589,703	-		PS417_07200	0.71	-0.8
1,589,725	+		PS417_07200	0.73	-0.5
1,589,725	+		PS417_07200	0.73	-0.8
1,589,726	-		PS417_07200	0.73	+0.3
1,589,726	-		PS417_07200	0.73	+0.5
1,589,726	-		PS417_07200	0.73	-1.6
1,589,726	-		PS417_07200	0.73	-2.3
1,590,061	+				+5.0
1,590,224	+				-1.2
1,590,224	+				+0.3
1,590,224	+				-0.1
1,590,230	+				+0.4
1,590,230	+				+1.5
1,590,684	+		PS417_07205	0.41	+0.4
1,590,684	+		PS417_07205	0.41	-0.8
1,590,684	+		PS417_07205	0.41	+0.7
1,590,684	+				+0.4
1,590,685	-		PS417_07205	0.41	+1.1
1,590,687	+		PS417_07205	0.41	-0.1
1,590,688	-				-0.6
1,590,688	-				+2.7
1,590,918	-		PS417_07205	0.59	+0.9