Strain Fitness in Pseudomonas simiae WCS417 around PS417_07075

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,565,012	+				+1.1
1,565,064	+				-1.4
1,565,064	+				+0.5
1,565,064	+				-0.2
1,565,064	+				-0.2
1,565,101	-				+0.8
1,565,110	+				+2.1
1,565,110	+				-1.0
1,565,111	-				+1.8
1,565,419	+		PS417_07070	0.66	+0.5
1,565,419	+		PS417_07070	0.66	+0.9
1,565,419	+		PS417_07070	0.66	+1.7
1,565,419	+		PS417_07070	0.66	+1.1
1,565,420	-		PS417_07070	0.66	-2.1
1,565,420	-		PS417_07070	0.66	-0.5
1,565,420	-		PS417_07070	0.66	-1.5
1,565,568	+				-0.7
1,565,568	+				+1.9
1,565,568	+				-0.2
1,565,568	+				-1.0
1,565,569	-				+1.9
1,565,569	-				+0.4
1,565,569	-				+2.9
1,565,621	+				+0.5
1,565,635	-				+0.1
1,565,635	-				-0.5
1,565,728	+				+0.1
1,565,803	-				-1.2
1,565,803	-				-1.1
1,565,916	+		PS417_07075	0.18	-1.2
1,565,946	+		PS417_07075	0.21	+0.1
1,566,172	-		PS417_07075	0.44	-1.1
1,566,496	-		PS417_07075	0.77	+0.1
1,566,525	+		PS417_07075	0.80	-0.4
1,566,526	-		PS417_07075	0.80	-1.2
1,566,706	+				-0.5
1,566,707	-				+1.7
1,566,729	-				-0.4
1,566,746	+				+0.5
1,566,747	-				-0.2
1,566,756	+				-1.6
1,566,757	-				+0.9
1,566,759	+				-1.6
1,566,775	+				+0.9
1,566,777	+				+1.3
1,566,777	+				-0.8
1,566,777	+				-0.6
1,566,778	-				+0.4
1,566,778	-				+2.4
1,566,778	-				-1.5
1,566,819	+				+1.4
1,566,831	+				+0.0
1,566,831	+				-2.4
1,566,831	+				-1.2
1,566,832	-				-0.1
1,566,889	-		PS417_07080	0.10	-1.2
1,566,889	-		PS417_07080	0.10	-0.6
1,566,889	-		PS417_07080	0.10	-0.0
1,566,889	-		PS417_07080	0.10	-0.4
1,566,889	-		PS417_07080	0.10	-1.0
1,566,889	-		PS417_07080	0.10	-1.4
1,566,889	-		PS417_07080	0.10	-0.7
1,566,889	-		PS417_07080	0.10	-0.1
1,567,068	-				-0.2
1,567,083	+		PS417_07080	0.25	-0.7
1,567,084	-		PS417_07080	0.25	-2.1
1,567,084	-		PS417_07080	0.25	+0.4
1,567,105	-		PS417_07080	0.27	-0.1
1,567,105	-		PS417_07080	0.27	-0.5
1,567,154	-		PS417_07080	0.31	-0.1
1,567,154	-		PS417_07080	0.31	+0.0
1,567,154	-		PS417_07080	0.31	+0.1
1,567,170	+		PS417_07080	0.32	-0.4
1,567,171	-		PS417_07080	0.32	+0.8
1,567,171	-		PS417_07080	0.32	+0.0
1,567,344	+		PS417_07080	0.45	+0.7
1,567,344	+		PS417_07080	0.45	+0.4
1,567,458	+		PS417_07080	0.54	-1.1
1,567,458	+		PS417_07080	0.54	-0.1
1,567,508	+		PS417_07080	0.58	+0.1
1,567,509	-		PS417_07080	0.58	+0.4