Strain Fitness in Pseudomonas simiae WCS417 around PS417_07005

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,544,520	+		PS417_06990	0.18	-3.4
1,544,712	+		PS417_06990	0.54	-0.7
1,544,744	-		PS417_06990	0.61	-0.4
1,544,762	+		PS417_06990	0.64	-0.8
1,544,763	-		PS417_06990	0.64	-1.0
1,544,763	-		PS417_06990	0.64	+1.1
1,544,763	-		PS417_06990	0.64	+0.2
1,544,764	+		PS417_06990	0.64	+0.8
1,544,764	+		PS417_06990	0.64	+0.5
1,544,764	+		PS417_06990	0.64	+1.0
1,544,764	+		PS417_06990	0.64	-1.0
1,544,764	+		PS417_06990	0.64	+1.1
1,544,765	-		PS417_06990	0.65	+0.3
1,544,765	-		PS417_06990	0.65	+1.3
1,544,765	-		PS417_06990	0.65	+1.4
1,544,765	-		PS417_06990	0.65	+0.6
1,544,768	+		PS417_06990	0.65	+1.5
1,544,768	+		PS417_06990	0.65	+1.1
1,544,774	-		PS417_06990	0.66	+0.4
1,544,877	+		PS417_06990	0.86	-0.1
1,544,878	-		PS417_06990	0.86	+0.2
1,544,892	-		PS417_06990	0.89	-2.1
1,544,892	-		PS417_06990	0.89	+0.3
1,544,892	-		PS417_06990	0.89	-0.5
1,544,939	+				-0.0
1,544,939	+				-2.4
1,545,004	+				+1.2
1,545,021	-				+0.4
1,545,047	+				+1.4
1,545,185	+		PS417_06995	0.62	-1.5
1,545,185	+		PS417_06995	0.62	-1.6
1,545,186	-		PS417_06995	0.64	+0.6
1,545,186	-		PS417_06995	0.64	+1.4
1,545,193	+		PS417_06995	0.73	+0.5
1,545,199	+		PS417_06995	0.81	-0.5
1,545,199	+		PS417_06995	0.81	-0.8
1,545,204	+				-0.2
1,545,204	+				+0.3
1,545,205	-				-2.6
1,545,205	-				-1.4
1,545,313	+		PS417_07000	0.56	+0.2
1,545,313	+		PS417_07000	0.56	-0.3
1,545,313	+		PS417_07000	0.56	-0.3
1,545,314	-		PS417_07000	0.57	-2.3
1,545,419	+				+1.5
1,545,419	+				-0.5
1,545,419	+				-2.5
1,545,420	-				+0.6
1,545,518	+		PS417_07005	0.11	+1.4
1,545,519	-		PS417_07005	0.11	+0.9
1,545,635	-		PS417_07005	0.24	+0.9
1,545,635	-		PS417_07005	0.24	-2.3
1,546,014	+		PS417_07005	0.67	-0.2
1,546,014	+		PS417_07005	0.67	+1.0
1,546,014	+		PS417_07005	0.67	+0.9
1,546,014	+		PS417_07005	0.67	+1.0
1,546,014	+		PS417_07005	0.67	+0.3
1,546,121	-		PS417_07005	0.79	+0.1
1,546,278	+				-2.8
1,546,278	+				+1.2
1,546,279	-				+1.1
1,546,279	-				+1.6
1,546,312	+				+0.4
1,546,313	-				+2.9
1,546,313	-				-0.1
1,546,371	+				+0.4
1,546,523	-				-0.6
1,546,523	-				-0.7
1,546,639	-				+1.0
1,546,639	-				+1.0
1,546,650	-				-0.2
1,546,758	-		PS417_07010	0.21	+0.3
1,546,910	+		PS417_07010	0.43	-0.2
1,547,121	-		PS417_07010	0.73	-0.7
1,547,165	-		PS417_07010	0.80	-1.5
1,547,305	+				-0.2
1,547,305	+				-2.7