Strain Fitness in Pseudomonas simiae WCS417 around PS417_06980

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,541,947	+		PS417_06975	0.23	-0.0
1,542,031	+		PS417_06975	0.30	-0.7
1,542,032	-		PS417_06975	0.30	+1.8
1,542,082	+		PS417_06975	0.35	+4.4
1,542,083	-		PS417_06975	0.35	+0.1
1,542,083	-		PS417_06975	0.35	+0.8
1,542,298	+		PS417_06975	0.53	-1.8
1,542,298	+		PS417_06975	0.53	+0.5
1,542,299	-		PS417_06975	0.53	+0.9
1,542,299	-		PS417_06975	0.53	-0.9
1,542,299	-		PS417_06975	0.53	-0.3
1,542,306	-		PS417_06975	0.54	+1.5
1,542,343	-		PS417_06975	0.57	-0.6
1,542,407	+		PS417_06975	0.63	+0.3
1,542,407	+		PS417_06975	0.63	+0.9
1,542,407	+		PS417_06975	0.63	+0.1
1,542,407	+		PS417_06975	0.63	+1.0
1,542,407	+		PS417_06975	0.63	+0.1
1,542,407	+		PS417_06975	0.63	+0.6
1,542,408	-		PS417_06975	0.63	-0.7
1,542,408	-		PS417_06975	0.63	+0.8
1,542,408	-				-0.6
1,542,408	-		PS417_06975	0.63	-2.9
1,542,408	-		PS417_06975	0.63	-1.3
1,542,409	+		PS417_06975	0.63	-0.3
1,542,409	+		PS417_06975	0.63	-0.1
1,542,410	-		PS417_06975	0.63	+0.6
1,542,410	-		PS417_06975	0.63	+1.0
1,542,410	-		PS417_06975	0.63	+0.0
1,542,410	-		PS417_06975	0.63	+2.7
1,542,411	+		PS417_06975	0.63	+0.6
1,542,411	+		PS417_06975	0.63	-0.5
1,542,411	+		PS417_06975	0.63	+0.5
1,542,411	+		PS417_06975	0.63	-2.5
1,542,412	-		PS417_06975	0.63	-0.1
1,542,412	-		PS417_06975	0.63	+0.8
1,542,412	-		PS417_06975	0.63	-1.8
1,542,664	+		PS417_06975	0.85	-1.9
1,542,664	+		PS417_06975	0.85	+0.0
1,542,664	+		PS417_06975	0.85	+1.8
1,542,665	-		PS417_06975	0.85	-1.0
1,542,676	+		PS417_06975	0.86	-0.3
1,542,677	-		PS417_06975	0.86	-1.0
1,542,677	-		PS417_06975	0.86	+0.2
1,542,679	+		PS417_06975	0.86	-0.2
1,542,680	-		PS417_06975	0.86	-2.1
1,542,680	-		PS417_06975	0.86	+0.9
1,542,936	+				-0.1
1,542,936	+				-0.8
1,542,936	+				-2.2
1,542,936	+				+0.1
1,542,936	+				+0.1
1,542,937	-				-1.0
1,542,937	-				-2.0
1,542,944	-				-0.4
1,542,978	+		PS417_06980	0.12	+0.5
1,543,008	+		PS417_06980	0.14	+0.9
1,543,168	+		PS417_06980	0.28	+0.3
1,543,168	+		PS417_06980	0.28	+1.0
1,543,169	-		PS417_06980	0.28	+0.4
1,543,169	-		PS417_06980	0.28	+0.6
1,543,227	+		PS417_06980	0.33	+1.4
1,543,679	-		PS417_06980	0.71	+1.2
1,543,725	+		PS417_06980	0.75	+1.2
1,543,801	-		PS417_06980	0.81	+3.4
1,544,033	-				+0.0
1,544,084	+				+0.1
1,544,117	+				-1.2
1,544,320	+		PS417_06985	0.73	-0.6
1,544,320	+		PS417_06985	0.73	-1.4
1,544,320	+		PS417_06985	0.73	+0.7
1,544,320	+		PS417_06985	0.73	-2.4
1,544,320	+		PS417_06985	0.73	+0.8
1,544,320	+		PS417_06985	0.73	-2.6
1,544,321	-		PS417_06985	0.73	-0.1
1,544,321	-		PS417_06985	0.73	-0.3
1,544,321	-		PS417_06985	0.73	+1.1
1,544,321	-		PS417_06985	0.73	-0.6
1,544,520	+		PS417_06990	0.18	-3.4
1,544,712	+		PS417_06990	0.54	-0.7
1,544,744	-		PS417_06990	0.61	-0.4
1,544,762	+		PS417_06990	0.64	-0.8
1,544,763	-		PS417_06990	0.64	-1.0
1,544,763	-		PS417_06990	0.64	+1.1
1,544,763	-		PS417_06990	0.64	+0.2
1,544,764	+		PS417_06990	0.64	+0.8
1,544,764	+		PS417_06990	0.64	+0.5
1,544,764	+		PS417_06990	0.64	+1.0
1,544,764	+		PS417_06990	0.64	-1.0
1,544,764	+		PS417_06990	0.64	+1.1
1,544,765	-		PS417_06990	0.65	+0.3
1,544,765	-		PS417_06990	0.65	+1.3
1,544,765	-		PS417_06990	0.65	+1.4
1,544,765	-		PS417_06990	0.65	+0.6
1,544,768	+		PS417_06990	0.65	+1.5
1,544,768	+		PS417_06990	0.65	+1.1
1,544,774	-		PS417_06990	0.66	+0.4
1,544,877	+		PS417_06990	0.86	-0.1
1,544,878	-		PS417_06990	0.86	+0.2
1,544,892	-		PS417_06990	0.89	-2.1
1,544,892	-		PS417_06990	0.89	+0.3
1,544,892	-		PS417_06990	0.89	-0.5
1,544,939	+				-0.0
1,544,939	+				-2.4
1,545,004	+				+1.2
1,545,021	-				+0.4