Strain Fitness in Pseudomonas simiae WCS417 around PS417_06860

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,516,922	+				+0.2
1,517,061	+		PS417_06855	0.19	+0.6
1,517,061	+		PS417_06855	0.19	-2.1
1,517,061	+		PS417_06855	0.19	+0.1
1,517,061	+		PS417_06855	0.19	-0.9
1,517,061	+		PS417_06855	0.19	-0.5
1,517,062	-		PS417_06855	0.19	-2.1
1,517,062	-		PS417_06855	0.19	+0.1
1,517,062	-		PS417_06855	0.19	+0.2
1,517,118	+		PS417_06855	0.28	+0.5
1,517,118	+		PS417_06855	0.28	-1.2
1,517,119	-		PS417_06855	0.28	+0.7
1,517,119	-		PS417_06855	0.28	+0.2
1,517,119	-		PS417_06855	0.28	-0.1
1,517,142	+		PS417_06855	0.32	-1.3
1,517,142	+		PS417_06855	0.32	-1.7
1,517,142	+		PS417_06855	0.32	-0.2
1,517,143	-		PS417_06855	0.32	+0.2
1,517,143	-		PS417_06855	0.32	+0.1
1,517,143	-		PS417_06855	0.32	+0.1
1,517,347	-		PS417_06855	0.65	-0.2
1,517,579	+				-0.2
1,517,579	+				+0.3
1,517,579	+				-0.2
1,517,580	-				-1.7
1,517,580	-				-2.5
1,517,603	+				+0.3
1,517,603	+				-1.5
1,517,604	-				+1.3
1,517,604	-				-0.4
1,517,604	-				+0.2
1,517,644	+				-0.7
1,517,806	+				+0.9
1,517,807	-				-0.2
1,517,894	-		PS417_06860	0.17	-1.4
1,518,094	-		PS417_06860	0.33	-1.3
1,518,328	+		PS417_06860	0.52	-2.0
1,518,718	+		PS417_06860	0.84	-2.6
1,518,718	+		PS417_06860	0.84	-1.7
1,518,851	-				+0.3
1,518,899	-				+0.4
1,518,925	-				-1.5
1,519,018	+		PS417_06865	0.11	+1.2
1,519,018	+		PS417_06865	0.11	-0.7
1,519,132	-		PS417_06865	0.23	-1.1
1,519,173	+		PS417_06865	0.28	+0.6
1,519,444	-		PS417_06865	0.58	+1.0
1,519,864	+				+0.2
1,519,865	-				-0.2
1,519,893	-				-0.3