Strain Fitness in Pseudomonas simiae WCS417 around PS417_06690

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,480,997	+				-0.7
1,480,997	+				-2.0
1,480,997	+				+6.3
1,480,997	+				-2.0
1,480,997	+				-2.1
1,481,198	+				+0.5
1,481,364	-				-0.7
1,481,364	-		PS417_06685	0.59	-0.5
1,481,452	-				-1.0
1,481,456	-				+0.8
1,481,472	-				+0.6
1,481,475	-				+1.8
1,481,475	-				+0.6
1,481,540	-				+0.5
1,481,583	+				-0.7
1,481,583	+				+0.9
1,481,584	-				+0.8
1,481,584	-				-1.0
1,481,584	-				+1.6
1,481,694	-				+0.1
1,481,708	-				-0.8
1,481,740	-				-2.0
1,481,803	-				+0.3
1,481,805	+				-1.0
1,481,822	+				-0.3
1,481,941	+				-1.8
1,481,941	+				-0.0
1,481,941	+				+0.8
1,481,942	-				+0.2
1,481,942	-				-0.3
1,481,975	-				-1.2
1,481,975	-				+0.3
1,481,975	-				+0.6
1,482,074	-				-1.0
1,482,237	-		PS417_06690	0.29	+0.3
1,482,260	+		PS417_06690	0.32	-1.2
1,482,260	+		PS417_06690	0.32	-1.8
1,482,260	+		PS417_06690	0.32	-2.0
1,482,261	-		PS417_06690	0.32	-0.4
1,482,300	-		PS417_06690	0.36	-1.9
1,482,300	-		PS417_06690	0.36	-1.0
1,482,300	-		PS417_06690	0.36	-3.4
1,482,300	-		PS417_06690	0.36	+0.3
1,482,411	-		PS417_06690	0.50	+0.1
1,482,411	-		PS417_06690	0.50	-0.1
1,482,411	-		PS417_06690	0.50	-1.0
1,482,695	+		PS417_06690	0.83	-0.3
1,482,695	+		PS417_06690	0.83	-0.1
1,482,695	+		PS417_06690	0.83	+0.0
1,482,695	+		PS417_06690	0.83	-0.6
1,482,893	+				-0.1
1,482,894	-				-1.9
1,482,932	-				+1.8
1,482,932	-				+0.1
1,482,932	-				-0.6
1,483,312	-		PS417_06695	0.25	-3.4
1,483,312	-		PS417_06695	0.25	-0.9
1,483,446	-		PS417_06695	0.35	+0.2
1,483,446	-		PS417_06695	0.35	-0.2
1,483,446	-		PS417_06695	0.35	-1.8
1,483,446	-		PS417_06695	0.35	-0.6
1,483,488	-		PS417_06695	0.38	-2.1
1,483,755	+		PS417_06695	0.58	-1.0
1,483,789	-		PS417_06695	0.60	+0.8
1,483,812	+		PS417_06695	0.62	-0.7