Strain Fitness in Pseudomonas simiae WCS417 around PS417_00615

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
125,165	+				+0.7
125,165	+				-0.1
125,166	-				-0.2
125,262	+		PS417_00610	0.13	-0.4
125,306	-		PS417_00610	0.18	-0.5
125,444	+		PS417_00610	0.32	+0.6
125,617	+		PS417_00610	0.51	+1.1
125,617	+		PS417_00610	0.51	+1.0
125,618	-		PS417_00610	0.51	-1.7
125,695	+		PS417_00610	0.59	-1.2
125,695	+		PS417_00610	0.59	-0.9
125,695	+		PS417_00610	0.59	-0.3
125,750	+		PS417_00610	0.65	+1.5
125,891	+		PS417_00610	0.80	-1.1
125,908	+		PS417_00610	0.81	-2.4
125,908	+		PS417_00610	0.81	-0.5
125,981	+		PS417_00610	0.89	-1.1
125,982	-		PS417_00610	0.89	-0.7
126,068	+				-0.5
126,182	+		PS417_00615	0.13	+0.1
126,182	+		PS417_00615	0.13	-1.6
126,182	+		PS417_00615	0.13	+0.1
126,183	-		PS417_00615	0.13	+0.8
126,183	-		PS417_00615	0.13	-1.3
126,183	-		PS417_00615	0.13	+0.2
126,210	+		PS417_00615	0.17	-2.8
126,210	+		PS417_00615	0.17	+1.7
126,211	-		PS417_00615	0.17	+0.8
126,211	-		PS417_00615	0.17	-1.9
126,281	+		PS417_00615	0.26	+0.4
126,575	-		PS417_00615	0.65	+0.6
126,952	+				-0.3
126,952	+				-1.5
126,952	+				+1.2
127,063	+				+1.7
127,064	-				-2.2
127,112	+				-1.5
127,137	+				+1.1
127,167	-				-0.6
127,432	+		PS417_00620	0.37	-3.3
127,433	-		PS417_00620	0.37	-1.3
127,478	-		PS417_00620	0.43	+1.9
127,506	-		PS417_00620	0.47	-0.5
127,506	-		PS417_00620	0.47	+0.5
127,506	-		PS417_00620	0.47	-1.0
127,594	+		PS417_00620	0.60	+0.5
127,595	-		PS417_00620	0.60	-0.0
127,833	-				+0.1
127,833	-				+1.1