Strain Fitness in Pseudomonas simiae WCS417 around PS417_06135

Experiment: Gentamicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.008 mg/ml
1,358,063	+		PS417_06125	0.28	+1.0
1,358,063	+				-0.2
1,358,063	+		PS417_06125	0.28	+0.4
1,358,064	-		PS417_06125	0.28	+0.2
1,358,064	-		PS417_06125	0.28	-2.4
1,358,064	-		PS417_06125	0.28	-0.7
1,358,577	+				-0.1
1,358,588	-				-0.7
1,358,686	+		PS417_06130	0.21	+0.7
1,358,687	-		PS417_06130	0.21	-1.8
1,358,694	-		PS417_06130	0.23	+0.2
1,358,694	-		PS417_06130	0.23	+0.4
1,358,763	+		PS417_06130	0.40	-0.8
1,358,763	+		PS417_06130	0.40	+0.5
1,358,764	-		PS417_06130	0.40	+0.6
1,358,764	-		PS417_06130	0.40	-0.6
1,358,907	+		PS417_06130	0.76	+0.8
1,359,051	+				-2.0
1,359,051	+				-0.6
1,359,052	-				-3.7
1,359,052	-				+0.3
1,359,412	-		PS417_06135	0.14	-0.0
1,359,423	+		PS417_06135	0.15	+1.5
1,359,741	+		PS417_06135	0.27	-1.1
1,359,741	+		PS417_06135	0.27	+0.9
1,359,742	-		PS417_06135	0.27	+0.2
1,359,742	-		PS417_06135	0.27	-0.3
1,359,909	+		PS417_06135	0.34	+0.5
1,359,910	-		PS417_06135	0.34	+0.1
1,359,910	-		PS417_06135	0.34	+0.3
1,360,077	+		PS417_06135	0.41	+0.8
1,360,078	-		PS417_06135	0.41	+0.4
1,360,261	-				+0.8
1,360,261	-		PS417_06135	0.48	+0.1
1,360,296	+				+1.4
1,360,297	-		PS417_06135	0.49	-0.6
1,360,311	-		PS417_06135	0.50	+1.8
1,360,419	+		PS417_06135	0.54	+1.8
1,360,420	-		PS417_06135	0.54	+0.1
1,360,459	-		PS417_06135	0.56	+0.2
1,360,459	-		PS417_06135	0.56	-1.7
1,360,459	-		PS417_06135	0.56	+0.2
1,360,479	+		PS417_06135	0.56	+1.2
1,360,479	+		PS417_06135	0.56	+2.2
1,360,555	+		PS417_06135	0.59	+1.6
1,360,555	+		PS417_06135	0.59	+3.0
1,360,614	+		PS417_06135	0.62	-2.6
1,360,614	+		PS417_06135	0.62	+1.5
1,360,629	+		PS417_06135	0.62	+3.9
1,360,659	+		PS417_06135	0.64	+0.6
1,360,659	+		PS417_06135	0.64	+2.7
1,360,660	-		PS417_06135	0.64	-0.6
1,360,660	-		PS417_06135	0.64	-0.6
1,360,660	-		PS417_06135	0.64	-2.9
1,360,660	-		PS417_06135	0.64	+0.3
1,360,660	-		PS417_06135	0.64	-0.3
1,360,672	-		PS417_06135	0.64	+0.4
1,360,725	+		PS417_06135	0.66	+0.9
1,360,725	+		PS417_06135	0.66	+2.2
1,360,726	-		PS417_06135	0.66	+0.5
1,360,779	+		PS417_06135	0.68	+3.2
1,360,780	-		PS417_06135	0.68	-0.8
1,360,780	-		PS417_06135	0.68	+0.4
1,360,780	-		PS417_06135	0.68	-0.2
1,360,780	-		PS417_06135	0.68	-0.2
1,360,786	-		PS417_06135	0.69	-0.2
1,361,005	+		PS417_06135	0.77	+3.2
1,361,020	+		PS417_06135	0.78	+3.8
1,361,099	+		PS417_06135	0.81	+3.2
1,361,099	+		PS417_06135	0.81	+4.4
1,361,112	-		PS417_06135	0.82	-0.2
1,361,445	+				+4.1
1,361,446	-				-3.0
1,361,446	-				+1.2
1,361,446	-				-0.1
1,361,521	-				-0.2
1,361,550	-				-0.4
1,361,575	+				+1.8
1,361,750	+				-0.2
1,361,810	-		PS417_06140	0.25	+0.1
1,361,836	-		PS417_06140	0.37	-2.5
1,361,854	+		PS417_06140	0.46	+0.5
1,361,911	+		PS417_06140	0.73	+0.7
1,361,912	-		PS417_06140	0.73	-3.1
1,362,295	-		PS417_06145	0.50	-0.2
1,362,536	+				-0.8
1,362,541	-				-0.6