Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4255

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
5,102,226	+		Echvi_4254	0.15	-2.6
5,102,226	+		Echvi_4254	0.15	+0.2
5,102,226	+		Echvi_4254	0.15	+1.5
5,102,226	+		Echvi_4254	0.15	+1.2
5,102,226	+		Echvi_4254	0.15	+0.2
5,102,231	-		Echvi_4254	0.15	-0.1
5,102,248	+		Echvi_4254	0.17	-1.3
5,102,368	+		Echvi_4254	0.27	+0.6
5,102,369	-		Echvi_4254	0.27	+1.1
5,102,370	+		Echvi_4254	0.28	-1.2
5,102,370	+		Echvi_4254	0.28	-1.3
5,102,371	-		Echvi_4254	0.28	+0.3
5,102,371	-		Echvi_4254	0.28	-1.4
5,102,373	+		Echvi_4254	0.28	+0.7
5,102,374	-		Echvi_4254	0.28	+0.8
5,102,517	+		Echvi_4254	0.40	-1.1
5,102,517	+		Echvi_4254	0.40	-1.6
5,102,663	-		Echvi_4254	0.53	+0.2
5,102,699	-		Echvi_4254	0.56	-0.3
5,102,733	+		Echvi_4254	0.59	-0.9
5,102,733	+		Echvi_4254	0.59	-0.9
5,102,733	+		Echvi_4254	0.59	-1.6
5,102,770	+		Echvi_4254	0.63	-0.1
5,102,782	+		Echvi_4254	0.64	+1.7
5,102,844	+		Echvi_4254	0.69	+1.1
5,102,844	+		Echvi_4254	0.69	+1.8
5,102,844	+		Echvi_4254	0.69	-0.4
5,102,844	+		Echvi_4254	0.69	-1.2
5,102,844	+		Echvi_4254	0.69	+0.4
5,102,845	-		Echvi_4254	0.69	-1.0
5,102,845	-		Echvi_4254	0.69	+1.5
5,102,943	+		Echvi_4254	0.78	-0.4
5,102,944	-		Echvi_4254	0.78	-0.7
5,102,945	+		Echvi_4254	0.78	+1.0
5,102,945	+		Echvi_4254	0.78	-0.1
5,102,945	+		Echvi_4254	0.78	+1.0
5,103,010	+		Echvi_4254	0.84	+0.2
5,103,010	+		Echvi_4254	0.84	-0.2
5,103,010	+		Echvi_4254	0.84	-0.3
5,103,010	+		Echvi_4254	0.84	+0.7
5,103,010	+		Echvi_4254	0.84	-2.3
5,103,010	+		Echvi_4254	0.84	-0.8
5,103,010	+		Echvi_4254	0.84	-0.9
5,103,011	-		Echvi_4254	0.84	+0.6
5,103,011	-		Echvi_4254	0.84	-0.4
5,103,011	-		Echvi_4254	0.84	-0.9
5,103,028	-		Echvi_4254	0.85	+0.6
5,103,151	+				-0.1
5,103,152	-				+1.1
5,103,176	+				-0.5
5,103,177	-				-1.4
5,103,178	+				+1.2
5,103,178	+				+0.9
5,103,178	+				-2.6
5,103,178	+				+1.9
5,103,181	+				+1.2
5,103,181	+				+3.9
5,103,181	+				-0.8
5,103,182	-				+1.2
5,103,188	+				-2.4
5,103,194	+				+0.4
5,103,195	-				+0.3
5,103,195	-				+0.1
5,103,200	+				-0.7
5,103,243	+				-0.8
5,103,243	+				-0.2
5,103,265	-				-0.4
5,103,286	+				+0.5
5,103,287	-				-1.6
5,103,331	+				-0.3
5,103,610	-		Echvi_4255	0.23	+1.8
5,103,642	+		Echvi_4255	0.25	+1.3
5,103,643	-		Echvi_4255	0.25	-0.0
5,103,643	-		Echvi_4255	0.25	-0.4
5,103,718	+		Echvi_4255	0.30	+1.0
5,103,808	+		Echvi_4255	0.35	+0.2
5,103,808	+		Echvi_4255	0.35	-0.9
5,103,808	+		Echvi_4255	0.35	-0.3
5,103,808	+		Echvi_4255	0.35	-0.0
5,103,971	+		Echvi_4255	0.45	-1.2
5,103,979	-		Echvi_4255	0.45	+0.6
5,103,985	+		Echvi_4255	0.46	+1.9
5,103,985	+		Echvi_4255	0.46	+0.6
5,103,986	-		Echvi_4255	0.46	-0.7
5,103,986	-		Echvi_4255	0.46	+0.3
5,104,072	+		Echvi_4255	0.51	-0.9
5,104,072	+		Echvi_4255	0.51	+0.9
5,104,072	+		Echvi_4255	0.51	+1.4
5,104,072	+		Echvi_4255	0.51	-0.1
5,104,072	+		Echvi_4255	0.51	-0.1
5,104,073	-		Echvi_4255	0.51	+1.3
5,104,073	-		Echvi_4255	0.51	-0.0
5,104,073	-		Echvi_4255	0.51	+0.4
5,104,073	-		Echvi_4255	0.51	-0.9
5,104,073	-		Echvi_4255	0.51	+1.4
5,104,076	+		Echvi_4255	0.51	-0.1
5,104,090	+		Echvi_4255	0.52	-0.8
5,104,090	+		Echvi_4255	0.52	+0.2
5,104,114	+		Echvi_4255	0.53	-1.6
5,104,115	-		Echvi_4255	0.53	+1.7
5,104,115	-		Echvi_4255	0.53	+0.9
5,104,188	+		Echvi_4255	0.58	-0.1
5,104,189	-		Echvi_4255	0.58	+2.4
5,104,255	+		Echvi_4255	0.62	-1.1
5,104,256	-		Echvi_4255	0.62	-1.6
5,104,256	-		Echvi_4255	0.62	+1.7
5,104,310	+		Echvi_4255	0.65	-0.2
5,104,310	+		Echvi_4255	0.65	-0.1
5,104,310	+		Echvi_4255	0.65	+1.0
5,104,310	+		Echvi_4255	0.65	-2.4
5,104,310	+		Echvi_4255	0.65	+1.9
5,104,310	+		Echvi_4255	0.65	-0.3
5,104,310	+		Echvi_4255	0.65	-0.8
5,104,310	+		Echvi_4255	0.65	+0.2
5,104,311	-		Echvi_4255	0.65	+1.4
5,104,311	-		Echvi_4255	0.65	+0.5
5,104,311	-		Echvi_4255	0.65	+1.1
5,104,311	-		Echvi_4255	0.65	+1.3
5,104,346	-		Echvi_4255	0.67	-0.5
5,104,399	+		Echvi_4255	0.70	+2.5
5,104,474	-		Echvi_4255	0.75	-1.9
5,104,530	-		Echvi_4255	0.78	+0.9
5,104,530	-		Echvi_4255	0.78	-0.6
5,104,585	+		Echvi_4255	0.81	+0.7
5,104,585	+		Echvi_4255	0.81	+0.1
5,104,651	-		Echvi_4255	0.85	-0.1
5,104,745	-				-0.9
5,104,752	+				+0.6
5,104,770	-				+0.2
5,104,775	+				-2.7
5,104,776	-				+0.7
5,104,777	+				-1.9
5,104,875	+				-0.8
5,104,887	+				-0.1
5,104,888	-				-0.3
5,104,943	+				+0.4
5,104,986	+				+1.0
5,105,019	+				+0.6
5,105,084	+				+0.2
5,105,085	-				-2.7
5,105,085	-				+0.1
5,105,086	+				-0.9
5,105,188	+				-0.7
5,105,272	+		Echvi_4256	0.13	-1.7
5,105,342	-		Echvi_4256	0.15	+1.5
5,105,366	-		Echvi_4256	0.16	+0.1
5,105,366	-		Echvi_4256	0.16	-0.4
5,105,370	+		Echvi_4256	0.16	-1.3
5,105,446	+		Echvi_4256	0.19	-0.4
5,105,447	-		Echvi_4256	0.19	-1.7
5,105,451	+		Echvi_4256	0.19	-2.4
5,105,452	-		Echvi_4256	0.19	+0.2
5,105,596	+		Echvi_4256	0.24	+1.6
5,105,596	+		Echvi_4256	0.24	-0.7
5,105,597	-		Echvi_4256	0.24	-0.2
5,105,630	+		Echvi_4256	0.25	-1.1
5,105,652	+		Echvi_4256	0.26	+0.4
5,105,652	+		Echvi_4256	0.26	-0.6
5,105,652	+		Echvi_4256	0.26	-0.7
5,105,652	+		Echvi_4256	0.26	-0.6
5,105,653	-		Echvi_4256	0.26	-0.1
5,105,668	+		Echvi_4256	0.27	-1.7
5,105,669	-		Echvi_4256	0.27	-0.5
5,105,698	+		Echvi_4256	0.28	+0.2
5,105,723	+		Echvi_4256	0.28	-0.4
5,105,726	+		Echvi_4256	0.29	-0.9
5,105,749	+		Echvi_4256	0.29	+1.0
5,105,749	+		Echvi_4256	0.29	+1.1
5,105,783	+		Echvi_4256	0.31	-0.8
5,105,805	-		Echvi_4256	0.31	-0.1
5,105,808	-		Echvi_4256	0.31	-0.4
5,105,808	-		Echvi_4256	0.31	+1.5
5,105,808	-		Echvi_4256	0.31	-0.5
5,105,885	+		Echvi_4256	0.34	+0.0
5,105,885	+		Echvi_4256	0.34	-0.2
5,105,885	+		Echvi_4256	0.34	-0.2
5,105,885	+		Echvi_4256	0.34	-0.3
5,105,886	-		Echvi_4256	0.34	+0.4