Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4228

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
5,067,224	+		Echvi_4227	0.38	-0.2
5,067,242	+		Echvi_4227	0.39	-0.3
5,067,243	-		Echvi_4227	0.39	+0.0
5,067,318	-		Echvi_4227	0.44	-0.3
5,067,373	-		Echvi_4227	0.48	-1.0
5,067,379	+		Echvi_4227	0.48	-0.9
5,067,452	+		Echvi_4227	0.53	+1.4
5,067,502	+		Echvi_4227	0.57	+0.0
5,067,574	-		Echvi_4227	0.61	+0.5
5,067,582	-		Echvi_4227	0.62	+0.6
5,067,583	+		Echvi_4227	0.62	+1.2
5,067,583	+		Echvi_4227	0.62	-2.9
5,067,860	+		Echvi_4227	0.81	+0.4
5,067,931	+		Echvi_4227	0.85	+0.6
5,067,932	-		Echvi_4227	0.86	+1.2
5,067,932	-		Echvi_4227	0.86	-1.7
5,067,949	-		Echvi_4227	0.87	+0.2
5,067,951	-		Echvi_4227	0.87	-0.4
5,067,951	-		Echvi_4227	0.87	+1.9
5,067,951	-		Echvi_4227	0.87	-0.9
5,067,951	-		Echvi_4227	0.87	-0.7
5,068,048	+				-1.9
5,068,054	+				+0.6
5,068,059	+				-1.3
5,068,132	-				-0.0
5,068,141	-				+0.6
5,068,215	+				+0.8
5,068,216	-				-0.9
5,068,262	+				+1.9
5,068,285	-				-0.3
5,068,298	-				+0.0
5,068,320	+				-0.3
5,068,321	-				-1.7
5,068,417	-				+0.1
5,068,462	-				-0.2
5,068,475	-				+0.3
5,068,571	-		Echvi_4228	0.13	+0.6
5,068,571	-		Echvi_4228	0.13	+0.9
5,068,732	+		Echvi_4228	0.18	+0.3
5,068,732	+		Echvi_4228	0.18	+0.2
5,068,732	+		Echvi_4228	0.18	-1.6
5,068,733	-		Echvi_4228	0.18	-0.4
5,068,733	-		Echvi_4228	0.18	+0.7
5,068,747	-		Echvi_4228	0.19	+0.3
5,068,826	+		Echvi_4228	0.21	+0.3
5,068,832	-		Echvi_4228	0.21	+0.1
5,068,832	-		Echvi_4228	0.21	+0.5
5,068,834	+		Echvi_4228	0.21	+0.4
5,068,834	+		Echvi_4228	0.21	+0.2
5,068,834	+		Echvi_4228	0.21	-0.6
5,068,834	+		Echvi_4228	0.21	+0.0
5,068,834	+		Echvi_4228	0.21	-0.3
5,068,835	-		Echvi_4228	0.21	-0.6
5,068,836	+		Echvi_4228	0.21	+0.2
5,068,836	+		Echvi_4228	0.21	-0.5
5,068,837	-		Echvi_4228	0.21	-0.9
5,068,837	-		Echvi_4228	0.21	+0.9
5,069,002	+		Echvi_4228	0.27	-1.8
5,069,002	+		Echvi_4228	0.27	+0.7
5,069,003	-		Echvi_4228	0.27	-0.0
5,069,004	+		Echvi_4228	0.27	-2.4
5,069,004	+		Echvi_4228	0.27	-0.8
5,069,061	+		Echvi_4228	0.29	+0.1
5,069,061	+		Echvi_4228	0.29	-0.4
5,069,062	-		Echvi_4228	0.29	+0.0
5,069,062	-		Echvi_4228	0.29	+1.3
5,069,064	+		Echvi_4228	0.29	-0.3
5,069,065	-		Echvi_4228	0.29	-0.0
5,069,143	+		Echvi_4228	0.31	-0.7
5,069,144	-		Echvi_4228	0.31	-0.7
5,069,144	-		Echvi_4228	0.31	+0.0
5,069,206	+		Echvi_4228	0.33	-1.0
5,069,207	-		Echvi_4228	0.33	-1.1
5,069,207	-		Echvi_4228	0.33	-0.1
5,069,209	-		Echvi_4228	0.33	-0.5
5,069,238	+		Echvi_4228	0.34	-0.9
5,069,238	+		Echvi_4228	0.34	+0.3
5,069,239	-		Echvi_4228	0.34	+1.1
5,069,279	-		Echvi_4228	0.36	+0.1
5,069,279	-		Echvi_4228	0.36	+0.4
5,069,282	+		Echvi_4228	0.36	+1.1
5,069,282	+		Echvi_4228	0.36	-0.9
5,069,282	+		Echvi_4228	0.36	+0.4
5,069,318	-		Echvi_4228	0.37	-0.9
5,069,378	-		Echvi_4228	0.39	-0.8
5,069,430	+		Echvi_4228	0.41	+2.9
5,069,430	+		Echvi_4228	0.41	+0.1
5,069,442	+		Echvi_4228	0.41	-1.2
5,069,443	-		Echvi_4228	0.41	+0.1
5,069,443	-		Echvi_4228	0.41	+0.2
5,069,443	-		Echvi_4228	0.41	-1.3
5,069,446	+		Echvi_4228	0.41	-0.8
5,069,447	-		Echvi_4228	0.41	+1.0
5,069,447	-		Echvi_4228	0.41	+0.7
5,069,447	-		Echvi_4228	0.41	-0.5
5,069,448	+		Echvi_4228	0.41	-0.8
5,069,464	+		Echvi_4228	0.42	-1.7
5,069,466	+		Echvi_4228	0.42	+0.0
5,069,466	+		Echvi_4228	0.42	-0.0
5,069,467	-		Echvi_4228	0.42	-1.4
5,069,490	+		Echvi_4228	0.43	-0.6
5,069,608	+		Echvi_4228	0.46	-0.6
5,069,608	+		Echvi_4228	0.46	-0.4
5,069,691	+		Echvi_4228	0.49	-2.2
5,069,691	+		Echvi_4228	0.49	-1.3
5,069,692	-		Echvi_4228	0.49	+0.5
5,069,692	-		Echvi_4228	0.49	-0.1
5,069,732	-		Echvi_4228	0.50	-0.4
5,069,883	+		Echvi_4228	0.55	+0.3
5,069,884	-		Echvi_4228	0.55	+0.1
5,069,888	-		Echvi_4228	0.55	+0.1
5,070,088	+		Echvi_4228	0.62	+0.7
5,070,127	-		Echvi_4228	0.63	-0.7
5,070,136	-		Echvi_4228	0.63	+2.1
5,070,136	-		Echvi_4228	0.63	+0.8
5,070,361	-		Echvi_4228	0.71	-1.4
5,070,411	+		Echvi_4228	0.72	+1.0
5,070,411	+		Echvi_4228	0.72	+0.1
5,070,411	+		Echvi_4228	0.72	-1.2
5,070,412	-		Echvi_4228	0.72	+1.2
5,070,412	-		Echvi_4228	0.72	+0.2
5,070,412	-		Echvi_4228	0.72	-0.3
5,070,415	-		Echvi_4228	0.72	-0.1
5,070,415	-		Echvi_4228	0.72	+0.3
5,070,415	-		Echvi_4228	0.72	+0.0
5,070,498	+		Echvi_4228	0.75	-1.4
5,070,498	+		Echvi_4228	0.75	+0.7
5,070,500	+		Echvi_4228	0.75	-0.4
5,070,500	+		Echvi_4228	0.75	-0.7
5,070,600	+		Echvi_4228	0.78	+0.9
5,070,601	-		Echvi_4228	0.78	-1.1
5,070,647	+		Echvi_4228	0.80	-1.7
5,070,647	+		Echvi_4228	0.80	+1.8
5,070,784	+		Echvi_4228	0.84	+1.5
5,070,859	+		Echvi_4228	0.87	-0.5
5,070,891	-		Echvi_4228	0.88	-0.7
5,070,891	-		Echvi_4228	0.88	-0.0
5,070,959	-		Echvi_4228	0.90	-0.2
5,070,966	+				-1.3
5,070,967	-				-0.2
5,071,131	-				-0.1
5,071,216	+				+0.6
5,071,217	-				-0.1
5,071,268	+				+0.6
5,071,268	+				+1.9
5,071,269	-				-0.6
5,071,298	-				+0.2
5,071,311	+				+1.4
5,071,311	+				-0.8
5,071,312	-				+0.9
5,071,316	-				-1.3
5,071,366	+				-0.1
5,071,376	+				+0.6
5,071,393	+				+0.0
5,071,439	+				-0.7
5,071,459	+				-1.0
5,071,464	+				-0.8
5,071,469	+				-0.9
5,071,470	-				+1.8
5,071,470	-				-0.2
5,071,470	-				-1.0
5,071,522	+				+0.7
5,071,523	-				+3.1
5,071,528	+				-0.1
5,071,529	-				-1.6
5,071,594	+				+2.0
5,071,594	+				+1.6
5,071,649	+				-0.3
5,071,649	+				+0.3
5,071,698	+		Echvi_4229	0.11	+0.6
5,071,748	+		Echvi_4229	0.15	+1.9
5,071,749	-		Echvi_4229	0.15	+1.9
5,071,765	+		Echvi_4229	0.16	-0.7
5,071,859	+		Echvi_4229	0.24	-0.4
5,071,860	-		Echvi_4229	0.24	+0.4
5,072,078	+		Echvi_4229	0.43	-0.0
5,072,102	+		Echvi_4229	0.45	+0.6
5,072,103	-		Echvi_4229	0.45	+1.2
5,072,249	+		Echvi_4229	0.57	+0.3
5,072,264	-		Echvi_4229	0.58	+1.2