Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4202

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
5,021,093	+		Echvi_4201	0.84	-1.1
5,021,093	+		Echvi_4201	0.84	-0.3
5,021,093	+		Echvi_4201	0.84	+0.6
5,021,095	+		Echvi_4201	0.84	-0.9
5,021,096	-		Echvi_4201	0.84	-0.6
5,021,102	+		Echvi_4201	0.84	-0.1
5,021,171	+		Echvi_4201	0.86	+0.5
5,021,172	-		Echvi_4201	0.86	-1.3
5,021,218	-		Echvi_4201	0.87	-1.2
5,021,226	-		Echvi_4201	0.87	-0.4
5,021,255	-		Echvi_4201	0.87	+1.5
5,021,260	+		Echvi_4201	0.88	-0.4
5,021,260	+		Echvi_4201	0.88	+0.5
5,021,261	-		Echvi_4201	0.88	+0.2
5,021,261	-		Echvi_4201	0.88	+1.1
5,021,261	-		Echvi_4201	0.88	-1.4
5,021,278	+		Echvi_4201	0.88	-1.4
5,021,279	-		Echvi_4201	0.88	-0.8
5,021,316	-		Echvi_4201	0.89	-0.1
5,021,336	+		Echvi_4201	0.89	-1.4
5,021,347	+		Echvi_4201	0.90	+0.1
5,021,347	+		Echvi_4201	0.90	+0.0
5,021,347	+		Echvi_4201	0.90	-1.7
5,021,347	+		Echvi_4201	0.90	-1.3
5,021,348	-		Echvi_4201	0.90	-0.4
5,021,348	-		Echvi_4201	0.90	+0.0
5,021,359	+		Echvi_4201	0.90	+2.2
5,021,370	+				-0.8
5,021,370	+				-0.6
5,021,370	+				+0.2
5,021,370	+				-0.9
5,021,370	+				-0.5
5,021,370	+				-1.1
5,021,370	+				+1.1
5,021,371	-				-1.0
5,021,371	-				-1.3
5,021,371	-				-0.1
5,021,414	+				+0.5
5,021,414	+				-0.0
5,021,414	+				-2.2
5,021,414	+				+1.4
5,021,415	-				-1.6
5,021,415	-				+0.4
5,021,415	-				+0.4
5,021,415	-				+1.0
5,021,415	-				+0.3
5,021,417	+				-0.7
5,021,417	+				-0.6
5,021,417	+				-0.9
5,021,483	+				-0.6
5,021,483	+				+0.8
5,021,484	-				+1.2
5,021,484	-				+0.1
5,021,484	-				-1.0
5,021,485	+				+0.6
5,021,486	-				+0.2
5,021,486	-				-1.1
5,021,495	+				-0.2
5,021,604	+				+1.9
5,021,604	+				+2.9
5,021,616	-				+1.9
5,021,620	+				+1.0
5,021,624	+				-0.8
5,021,624	+				+0.3
5,021,637	+				+2.7
5,021,637	+				+0.5
5,021,697	+				-0.1
5,021,706	+				+0.5
5,021,770	+				+0.9
5,021,771	-				-1.1
5,021,771	-				-1.3
5,021,783	-				-1.1
5,021,787	-				+0.1
5,021,788	+				-0.0
5,021,805	+				+1.9
5,021,825	+				+1.4
5,021,825	+				-0.4
5,021,869	-				+1.0
5,021,869	-				-0.1
5,021,901	+				+0.3
5,021,902	-				-1.0
5,021,902	-				-0.5
5,021,902	-				-0.7
5,021,904	+				+0.0
5,021,904	+				-0.9
5,021,905	-				+0.9
5,022,028	-				-1.1
5,022,033	+				+0.4
5,022,036	+				+0.9
5,022,037	-				-0.9
5,022,059	-				-2.2
5,022,060	+				-1.7
5,022,108	+				+0.2
5,022,162	+				-0.7
5,022,163	-				+1.9
5,022,283	+		Echvi_4202	0.17	+1.4
5,022,299	-		Echvi_4202	0.18	-0.8
5,022,317	-		Echvi_4202	0.19	+0.4
5,022,333	+		Echvi_4202	0.20	+0.9
5,022,333	+		Echvi_4202	0.20	-1.6
5,022,334	-		Echvi_4202	0.20	+0.7
5,022,335	+		Echvi_4202	0.20	-0.2
5,022,336	-		Echvi_4202	0.20	+0.3
5,022,444	+		Echvi_4202	0.27	+1.7
5,022,468	+		Echvi_4202	0.28	-1.0
5,022,503	+		Echvi_4202	0.31	-0.2
5,022,503	+		Echvi_4202	0.31	-0.7
5,022,513	+		Echvi_4202	0.31	+3.5
5,022,514	-		Echvi_4202	0.31	+0.1
5,022,543	+		Echvi_4202	0.33	+1.4
5,022,543	+		Echvi_4202	0.33	-2.6
5,022,543	+		Echvi_4202	0.33	+0.1
5,022,543	+		Echvi_4202	0.33	+1.3
5,022,543	+		Echvi_4202	0.33	+0.3
5,022,544	-		Echvi_4202	0.33	-1.1
5,022,550	-		Echvi_4202	0.33	-1.1
5,022,579	+		Echvi_4202	0.35	-0.1
5,022,579	+		Echvi_4202	0.35	+1.0
5,022,582	-		Echvi_4202	0.35	-0.8
5,022,602	+		Echvi_4202	0.37	-2.8
5,022,603	-		Echvi_4202	0.37	-1.2
5,022,603	-		Echvi_4202	0.37	+0.6
5,022,603	-		Echvi_4202	0.37	+0.2
5,022,603	-		Echvi_4202	0.37	-0.8
5,022,604	+		Echvi_4202	0.37	-0.2
5,022,605	-		Echvi_4202	0.37	+0.5
5,022,609	+		Echvi_4202	0.37	+0.3
5,022,609	+		Echvi_4202	0.37	-1.3
5,022,609	+		Echvi_4202	0.37	+0.6
5,022,609	+		Echvi_4202	0.37	-0.4
5,022,609	+		Echvi_4202	0.37	+0.3
5,022,609	+		Echvi_4202	0.37	-0.1
5,022,610	-		Echvi_4202	0.37	-0.8
5,022,610	-		Echvi_4202	0.37	-2.2
5,022,610	-		Echvi_4202	0.37	+0.2
5,022,610	-		Echvi_4202	0.37	-0.5
5,022,610	-		Echvi_4202	0.37	+0.3
5,022,612	-		Echvi_4202	0.37	-0.7
5,022,612	-		Echvi_4202	0.37	-1.1
5,022,639	-		Echvi_4202	0.39	+0.9
5,022,639	-		Echvi_4202	0.39	+0.4
5,022,674	+		Echvi_4202	0.41	+2.6
5,022,674	+		Echvi_4202	0.41	-1.1
5,022,674	+		Echvi_4202	0.41	+1.6
5,022,674	+		Echvi_4202	0.41	+0.1
5,022,699	-		Echvi_4202	0.43	-0.0
5,022,730	-		Echvi_4202	0.44	-1.7
5,022,888	+		Echvi_4202	0.54	+0.1
5,022,889	-		Echvi_4202	0.54	+0.2
5,022,889	-		Echvi_4202	0.54	+0.6
5,023,063	+		Echvi_4202	0.65	-3.3
5,023,064	-		Echvi_4202	0.65	+1.1
5,023,106	-		Echvi_4202	0.67	-0.9
5,023,154	+		Echvi_4202	0.70	-1.2
5,023,154	+		Echvi_4202	0.70	+0.2
5,023,156	+		Echvi_4202	0.70	+1.5
5,023,156	+		Echvi_4202	0.70	+0.5
5,023,156	+		Echvi_4202	0.70	+0.9
5,023,156	+		Echvi_4202	0.70	-1.3
5,023,156	+		Echvi_4202	0.70	+1.9
5,023,157	-		Echvi_4202	0.70	+1.3
5,023,157	-		Echvi_4202	0.70	-0.0
5,023,157	-		Echvi_4202	0.70	+1.6
5,023,181	+		Echvi_4202	0.72	-1.9
5,023,189	-		Echvi_4202	0.72	-0.2
5,023,211	+		Echvi_4202	0.74	+0.3
5,023,233	+		Echvi_4202	0.75	+1.9
5,023,268	-		Echvi_4202	0.77	-1.5
5,023,290	+		Echvi_4202	0.79	-0.7
5,023,298	+		Echvi_4202	0.79	+0.7
5,023,298	+		Echvi_4202	0.79	-0.1
5,023,298	+		Echvi_4202	0.79	+0.2
5,023,298	+		Echvi_4202	0.79	-0.6
5,023,298	+		Echvi_4202	0.79	+0.0
5,023,298	+		Echvi_4202	0.79	+0.4
5,023,299	-		Echvi_4202	0.79	-2.9
5,023,299	-		Echvi_4202	0.79	+0.2
5,023,299	-		Echvi_4202	0.79	+1.3
5,023,335	+		Echvi_4202	0.81	+1.1
5,023,335	+		Echvi_4202	0.81	-0.3
5,023,335	+		Echvi_4202	0.81	-0.2
5,023,336	-		Echvi_4202	0.81	+0.7
5,023,336	-		Echvi_4202	0.81	-1.4
5,023,341	+		Echvi_4202	0.82	+0.5
5,023,342	-		Echvi_4202	0.82	-0.2
5,023,342	-		Echvi_4202	0.82	+0.2
5,023,363	+		Echvi_4202	0.83	-0.2
5,023,429	-		Echvi_4202	0.87	+1.2
5,023,436	+		Echvi_4202	0.87	+1.2
5,023,453	-		Echvi_4202	0.88	-0.2
5,023,530	+				+0.6
5,023,531	-				+0.6
5,023,586	-				-0.5
5,023,616	+				-1.7
5,023,617	-				+0.0
5,023,647	-				+0.2
5,023,662	-				+0.5
5,023,681	+				+0.9
5,023,682	-				-1.3
5,023,705	+				+0.4
5,023,706	-				-0.5
5,023,785	+				-0.6
5,023,862	+				-0.6
5,023,872	+				+0.2
5,023,872	+				-0.8
5,023,872	+				+0.5
5,023,892	+				-0.9
5,023,892	+				-0.5
5,023,892	+				-0.7
5,023,893	-				-0.4
5,024,078	+		Echvi_4203	0.12	+0.1
5,024,121	+		Echvi_4203	0.14	-0.8
5,024,121	+		Echvi_4203	0.14	-0.3
5,024,121	+		Echvi_4203	0.14	-2.4
5,024,121	+		Echvi_4203	0.14	-0.1
5,024,122	-		Echvi_4203	0.14	+1.7
5,024,130	+		Echvi_4203	0.14	-0.7
5,024,130	+		Echvi_4203	0.14	+1.0
5,024,130	+		Echvi_4203	0.14	-0.6
5,024,131	-		Echvi_4203	0.14	-0.2
5,024,131	-		Echvi_4203	0.14	+0.7
5,024,131	-		Echvi_4203	0.14	+0.4
5,024,131	-		Echvi_4203	0.14	-0.4
5,024,132	+		Echvi_4203	0.14	-0.1
5,024,133	-		Echvi_4203	0.14	-0.1
5,024,250	-		Echvi_4203	0.17	-0.7
5,024,312	+		Echvi_4203	0.19	+0.6
5,024,312	+		Echvi_4203	0.19	-0.1
5,024,313	-		Echvi_4203	0.19	+0.4
5,024,313	-		Echvi_4203	0.19	+0.3
5,024,313	-		Echvi_4203	0.19	-1.8
5,024,340	+		Echvi_4203	0.20	+0.1
5,024,341	-		Echvi_4203	0.20	-0.3
5,024,355	+		Echvi_4203	0.21	-0.9
5,024,356	-		Echvi_4203	0.21	+0.2
5,024,387	-		Echvi_4203	0.21	-2.3
5,024,387	-		Echvi_4203	0.21	-0.2
5,024,387	-		Echvi_4203	0.21	-1.2
5,024,391	+		Echvi_4203	0.22	+0.1
5,024,392	-		Echvi_4203	0.22	+0.3
5,024,398	-		Echvi_4203	0.22	-0.5
5,024,398	-		Echvi_4203	0.22	-1.9
5,024,399	+		Echvi_4203	0.22	-0.3
5,024,623	-		Echvi_4203	0.28	-0.2