Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2600

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
3,081,252	-		Echvi_2598	0.88	-1.1
3,081,252	-		Echvi_2598	0.88	-0.1
3,081,257	+		Echvi_2598	0.88	-1.5
3,081,282	-				+1.9
3,081,282	-				+1.9
3,081,285	-				+1.1
3,081,478	+		Echvi_2599	0.15	+0.4
3,081,484	+		Echvi_2599	0.16	+0.1
3,081,484	+		Echvi_2599	0.16	-0.3
3,081,485	-		Echvi_2599	0.16	+1.1
3,081,502	-		Echvi_2599	0.18	-1.8
3,081,512	-		Echvi_2599	0.19	-1.5
3,081,512	-		Echvi_2599	0.19	+0.9
3,081,512	-		Echvi_2599	0.19	-0.4
3,081,520	-		Echvi_2599	0.20	+0.6
3,081,642	-		Echvi_2599	0.33	-0.1
3,081,669	+		Echvi_2599	0.36	+2.0
3,081,703	+		Echvi_2599	0.40	+1.4
3,081,706	+		Echvi_2599	0.40	+0.6
3,081,707	-		Echvi_2599	0.40	+0.3
3,081,726	-		Echvi_2599	0.42	+1.0
3,081,726	-		Echvi_2599	0.42	+0.8
3,081,731	+		Echvi_2599	0.43	+0.6
3,081,749	+		Echvi_2599	0.45	-0.6
3,081,753	+		Echvi_2599	0.45	+0.7
3,081,754	-		Echvi_2599	0.45	-0.2
3,081,773	-		Echvi_2599	0.47	-1.4
3,081,801	+		Echvi_2599	0.50	-0.0
3,081,836	+		Echvi_2599	0.54	-0.1
3,081,881	+		Echvi_2599	0.59	-2.8
3,081,894	-		Echvi_2599	0.60	-1.4
3,081,932	+		Echvi_2599	0.65	+0.9
3,081,988	+		Echvi_2599	0.71	+0.9
3,081,991	+		Echvi_2599	0.71	+0.6
3,081,991	+		Echvi_2599	0.71	+1.2
3,081,992	-		Echvi_2599	0.71	+1.1
3,082,022	+		Echvi_2599	0.74	+0.4
3,082,070	+		Echvi_2599	0.80	+0.4
3,082,071	-		Echvi_2599	0.80	-0.7
3,082,071	-		Echvi_2599	0.80	-0.3
3,082,146	+		Echvi_2599	0.88	+0.8
3,082,179	+				+1.1
3,082,179	+				+1.7
3,082,179	+				+1.0
3,082,199	+				+0.5
3,082,205	-				+0.1
3,082,242	+				+0.8
3,082,254	+				+2.4
3,082,255	-				+0.0
3,082,255	-				-1.3
3,082,269	+				+0.3
3,082,270	-				+0.9
3,082,270	-				-0.5
3,082,273	+				-0.1
3,082,273	+				-0.0
3,082,273	+				-0.4
3,082,273	+				-0.7
3,082,273	+				-1.5
3,082,273	+				+0.5
3,082,274	-				+1.3
3,082,274	-				+0.5
3,082,275	+				+1.3
3,082,275	+				+0.7
3,082,275	+				+1.7
3,082,276	-				+0.0
3,082,284	+				+0.6
3,082,285	-				+0.8
3,082,285	-				+1.7
3,082,329	+		Echvi_2600	0.10	+0.4
3,082,329	+		Echvi_2600	0.10	-0.5
3,082,330	-		Echvi_2600	0.10	+0.5
3,082,386	-		Echvi_2600	0.17	+2.1
3,082,407	+		Echvi_2600	0.19	+0.5
3,082,407	+		Echvi_2600	0.19	+0.9
3,082,426	+		Echvi_2600	0.22	-1.7
3,082,427	-		Echvi_2600	0.22	-1.0
3,082,445	+		Echvi_2600	0.24	+1.4
3,082,446	-		Echvi_2600	0.24	+0.4
3,082,446	-		Echvi_2600	0.24	+0.3
3,082,474	+		Echvi_2600	0.27	+0.8
3,082,489	+		Echvi_2600	0.29	-0.6
3,082,490	-		Echvi_2600	0.29	+0.5
3,082,555	-		Echvi_2600	0.37	+1.0
3,082,558	-		Echvi_2600	0.37	+0.8
3,082,567	+		Echvi_2600	0.38	+0.7
3,082,568	-		Echvi_2600	0.38	-0.2
3,082,625	-		Echvi_2600	0.45	+0.3
3,082,707	-		Echvi_2600	0.55	-1.5
3,082,720	-		Echvi_2600	0.56	+0.7
3,082,722	+		Echvi_2600	0.56	+0.4
3,082,722	+		Echvi_2600	0.56	+0.6
3,082,733	-		Echvi_2600	0.58	+0.8
3,082,809	-		Echvi_2600	0.67	+1.4
3,082,824	+		Echvi_2600	0.68	+0.6
3,082,840	-		Echvi_2600	0.70	+0.6
3,082,873	+		Echvi_2600	0.74	+0.1
3,082,874	-		Echvi_2600	0.74	+2.6
3,082,876	-		Echvi_2600	0.75	+0.5
3,082,902	-		Echvi_2600	0.78	+0.3
3,082,902	-		Echvi_2600	0.78	+0.3
3,082,905	+		Echvi_2600	0.78	-0.1
3,082,905	+		Echvi_2600	0.78	+0.8
3,082,906	-		Echvi_2600	0.78	+0.7
3,082,906	-		Echvi_2600	0.78	-0.2
3,082,979	+		Echvi_2600	0.87	+0.6
3,082,980	-		Echvi_2600	0.87	+0.6
3,082,980	-		Echvi_2600	0.87	+0.5
3,082,984	+		Echvi_2600	0.87	+0.6
3,083,030	+				+2.1
3,083,034	+				+0.2
3,083,042	+				-0.3
3,083,042	+				-0.7
3,083,043	-				+0.3
3,083,043	-				-0.1
3,083,043	-				+0.2
3,083,045	+				+0.4
3,083,045	+				+2.0
3,083,046	-				+0.4
3,083,046	-				+1.4
3,083,050	+				-0.8
3,083,050	+				+0.5
3,083,050	+				+0.3
3,083,050	+				+1.3
3,083,050	+				-0.9
3,083,050	+				-0.8
3,083,050	+				+0.3
3,083,050	+				+1.4
3,083,050	+				+1.7
3,083,050	+				+1.2
3,083,051	-				+0.8
3,083,051	-				-1.8
3,083,051	-				+1.5
3,083,051	-				+0.4
3,083,051	-				-0.5
3,083,051	-				+0.7
3,083,051	-				+0.1
3,083,051	-				-0.1
3,083,051	-				+1.3
3,083,052	+				+0.2
3,083,052	+				-1.1
3,083,052	+				-0.4
3,083,053	-				-1.0
3,083,053	-				+0.3
3,083,053	-				+0.6
3,083,054	+				+0.8
3,083,055	-				+1.7
3,083,055	-				+0.5
3,083,129	-				+1.5
3,083,132	+				-1.0
3,083,132	+				+1.7
3,083,132	+				-0.7
3,083,132	+				+0.2
3,083,133	-				-2.1
3,083,133	-				-0.4
3,083,133	-				-1.2
3,083,133	-				+0.1
3,083,146	+				+0.3
3,083,208	+		Echvi_2601	0.14	-0.3
3,083,209	-		Echvi_2601	0.14	+0.4
3,083,218	+		Echvi_2601	0.15	+0.0
3,083,219	-		Echvi_2601	0.15	-0.2
3,083,277	-		Echvi_2601	0.21	+1.3
3,083,294	-		Echvi_2601	0.23	-0.3
3,083,294	-		Echvi_2601	0.23	+1.0
3,083,442	+		Echvi_2601	0.39	-0.5
3,083,442	+		Echvi_2601	0.39	-0.1
3,083,454	+		Echvi_2601	0.41	-0.5
3,083,454	+		Echvi_2601	0.41	-0.3
3,083,481	+		Echvi_2601	0.44	-0.7
3,083,544	+		Echvi_2601	0.51	+1.3
3,083,545	-		Echvi_2601	0.51	-0.1
3,083,548	+		Echvi_2601	0.51	+0.4
3,083,549	-		Echvi_2601	0.51	+0.5
3,083,573	-		Echvi_2601	0.54	+0.3
3,083,590	+		Echvi_2601	0.56	-1.1
3,083,591	-		Echvi_2601	0.56	+0.0
3,083,591	-		Echvi_2601	0.56	-0.4
3,083,592	+		Echvi_2601	0.56	-0.1
3,083,592	+		Echvi_2601	0.56	-0.2
3,083,592	+		Echvi_2601	0.56	+0.4
3,083,592	+		Echvi_2601	0.56	-0.0
3,083,596	+		Echvi_2601	0.56	-1.3
3,083,597	-		Echvi_2601	0.56	+0.3
3,083,597	-		Echvi_2601	0.56	+1.0
3,083,597	-		Echvi_2601	0.56	-1.3
3,083,677	+		Echvi_2601	0.65	-2.3
3,083,678	-		Echvi_2601	0.65	+0.8
3,083,680	+		Echvi_2601	0.66	+0.4
3,083,681	-		Echvi_2601	0.66	-0.3
3,083,767	+		Echvi_2601	0.75	+0.1
3,083,789	+		Echvi_2601	0.78	-0.1
3,083,790	-		Echvi_2601	0.78	+0.3
3,083,790	-		Echvi_2601	0.78	+0.6
3,083,794	+		Echvi_2601	0.78	-0.1
3,083,794	+		Echvi_2601	0.78	-0.3
3,083,813	+		Echvi_2601	0.80	-0.7
3,083,813	+		Echvi_2601	0.80	-1.1
3,083,813	+		Echvi_2601	0.80	+0.4
3,083,816	-		Echvi_2601	0.81	-0.4
3,083,851	+		Echvi_2601	0.84	-0.8
3,083,862	+		Echvi_2601	0.86	-0.6
3,083,881	-		Echvi_2601	0.88	+0.8
3,083,893	+		Echvi_2601	0.89	+0.2
3,083,893	+		Echvi_2601	0.89	+1.0
3,083,893	+		Echvi_2601	0.89	-0.1
3,083,914	+				+0.2
3,083,915	-				-1.0
3,083,927	+				-0.3
3,083,937	+				+0.7
3,083,948	-				+0.0
3,083,949	+				+1.2
3,083,979	+				-0.4