Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1989

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
2,342,108	+				-0.8
2,342,237	+		Echvi_1987	0.23	-0.9
2,342,403	-		Echvi_1987	0.50	+1.1
2,342,469	+		Echvi_1987	0.60	+0.8
2,342,470	-		Echvi_1987	0.60	+0.1
2,342,470	-		Echvi_1987	0.60	-1.5
2,342,501	-		Echvi_1987	0.65	+0.7
2,342,526	+		Echvi_1987	0.69	+0.9
2,342,526	+		Echvi_1987	0.69	-0.1
2,342,527	-		Echvi_1987	0.70	-0.3
2,342,537	-		Echvi_1987	0.71	+0.8
2,342,636	-		Echvi_1987	0.87	+0.0
2,342,747	+				-0.2
2,342,747	+				+0.0
2,342,747	+				+0.8
2,342,748	-				+1.5
2,342,748	-				+0.8
2,342,749	+				+0.2
2,342,750	-				+0.8
2,342,777	-		Echvi_1988	0.16	+1.3
2,342,777	-		Echvi_1988	0.16	+0.8
2,342,777	-		Echvi_1988	0.16	+2.3
2,342,827	-		Echvi_1988	0.33	-1.8
2,342,889	-		Echvi_1988	0.54	-1.3
2,342,926	+		Echvi_1988	0.67	-0.9
2,342,926	+		Echvi_1988	0.67	+0.8
2,342,981	+		Echvi_1988	0.86	+2.1
2,342,993	+				+2.1
2,342,994	-				-0.5
2,342,998	+				+0.9
2,342,998	+				+1.9
2,343,006	-				+0.2
2,343,036	+				-0.0
2,343,040	+				+0.6
2,343,041	-				+1.3
2,343,041	-				-1.5
2,343,066	+				-0.1
2,343,068	+				+0.6
2,343,068	+				-0.5
2,343,068	+				+0.7
2,343,068	+				+0.1
2,343,068	+				-1.8
2,343,068	+				+1.3
2,343,068	+				+1.2
2,343,069	-				-2.2
2,343,069	-				-0.2
2,343,069	-				+1.5
2,343,069	-				+0.7
2,343,069	-				+0.8
2,343,071	+				+0.6
2,343,071	+				+0.3
2,343,071	+				+1.0
2,343,071	+				+0.2
2,343,071	+				+2.5
2,343,071	+				-0.4
2,343,071	+				+0.1
2,343,072	-				-0.0
2,343,072	-				+0.2
2,343,073	+				+0.2
2,343,073	+				-1.0
2,343,074	-				+0.2
2,343,077	-				+0.4
2,343,103	+				-2.8
2,343,103	+				+0.8
2,343,105	+				-1.3
2,343,105	+				-0.3
2,343,134	-				-0.1
2,343,140	+				+0.9
2,343,273	+		Echvi_1989	0.13	+1.6
2,343,274	-		Echvi_1989	0.13	-0.5
2,343,274	-		Echvi_1989	0.13	+0.3
2,343,316	+		Echvi_1989	0.16	-0.7
2,343,316	+		Echvi_1989	0.16	-0.4
2,343,316	+		Echvi_1989	0.16	-2.0
2,343,316	+		Echvi_1989	0.16	-0.7
2,343,316	+		Echvi_1989	0.16	-0.5
2,343,316	+		Echvi_1989	0.16	-0.2
2,343,317	-		Echvi_1989	0.16	-0.7
2,343,317	-		Echvi_1989	0.16	+0.1
2,343,317	-		Echvi_1989	0.16	+0.6
2,343,317	-		Echvi_1989	0.16	-0.3
2,343,317	-		Echvi_1989	0.16	-0.1
2,343,317	-		Echvi_1989	0.16	-0.1
2,343,368	-		Echvi_1989	0.20	-0.4
2,343,386	+		Echvi_1989	0.21	+0.3
2,343,387	-		Echvi_1989	0.21	-1.9
2,343,392	+		Echvi_1989	0.21	+0.0
2,343,393	-		Echvi_1989	0.21	-1.4
2,343,423	-		Echvi_1989	0.24	-2.9
2,343,425	-		Echvi_1989	0.24	-1.5
2,343,578	+		Echvi_1989	0.34	-2.0
2,343,579	-		Echvi_1989	0.34	-0.1
2,343,579	-		Echvi_1989	0.34	-2.5
2,343,580	+		Echvi_1989	0.34	+0.7
2,343,637	+		Echvi_1989	0.38	-2.5
2,343,638	-		Echvi_1989	0.38	-1.9
2,343,662	-		Echvi_1989	0.40	+1.3
2,343,666	-		Echvi_1989	0.40	-0.9
2,343,721	-		Echvi_1989	0.44	+0.9
2,343,781	+		Echvi_1989	0.48	-1.2
2,343,781	+		Echvi_1989	0.48	+0.5
2,343,809	-		Echvi_1989	0.50	+0.1
2,343,809	-		Echvi_1989	0.50	-0.6
2,343,813	+		Echvi_1989	0.50	+0.5
2,343,814	-		Echvi_1989	0.50	-0.9
2,343,838	+		Echvi_1989	0.52	-1.1
2,343,839	-		Echvi_1989	0.52	-1.3
2,343,869	-		Echvi_1989	0.54	-1.8
2,343,889	+		Echvi_1989	0.55	-0.2
2,343,901	+		Echvi_1989	0.56	-0.1
2,343,916	-		Echvi_1989	0.57	+0.5
2,343,922	-		Echvi_1989	0.57	+1.1
2,344,011	-		Echvi_1989	0.64	-0.2
2,344,073	-		Echvi_1989	0.68	-0.1
2,344,160	+		Echvi_1989	0.74	-1.1
2,344,273	+		Echvi_1989	0.81	-0.8
2,344,301	+		Echvi_1989	0.83	+1.5
2,344,301	+		Echvi_1989	0.83	-0.4
2,344,301	+		Echvi_1989	0.83	-0.0
2,344,301	+		Echvi_1989	0.83	+1.6
2,344,302	-		Echvi_1989	0.83	-0.7
2,344,302	-		Echvi_1989	0.83	-2.0
2,344,321	-		Echvi_1989	0.85	+1.0
2,344,322	+		Echvi_1989	0.85	-1.3
2,344,399	-		Echvi_1989	0.90	+0.7
2,344,403	+				+2.0
2,344,403	+				-1.6
2,344,404	-				-0.6
2,344,462	-				-0.1
2,344,462	-				+0.1
2,344,465	+				+0.2
2,344,466	-				+0.1
2,344,544	+				-0.4
2,344,545	-				+0.3
2,344,582	-				+4.1
2,344,603	+				-1.3
2,344,604	-				-0.3
2,344,604	-				-0.3
2,344,604	-				+1.1
2,344,605	+				-1.3
2,344,605	+				+1.4
2,344,605	+				-0.0
2,344,606	-				+0.3
2,344,628	+				+0.3
2,344,628	+				+0.6
2,344,628	+				+1.0
2,344,633	-				-0.3
2,344,633	-				-2.1
2,344,689	+		Echvi_1990	0.24	-1.0
2,344,782	+		Echvi_1990	0.49	+0.3
2,344,790	-		Echvi_1990	0.51	-0.3
2,344,790	-		Echvi_1990	0.51	-1.4
2,344,790	-		Echvi_1990	0.51	+0.7
2,344,790	-		Echvi_1990	0.51	-0.7
2,344,863	-		Echvi_1990	0.71	-0.2
2,344,863	-		Echvi_1990	0.71	-0.4
2,344,864	+		Echvi_1990	0.71	+0.9
2,344,864	+		Echvi_1990	0.71	-0.8
2,344,864	+		Echvi_1990	0.71	+1.0
2,344,864	+		Echvi_1990	0.71	-0.1
2,344,882	+		Echvi_1990	0.76	-0.0
2,344,883	-		Echvi_1990	0.76	-0.1
2,344,895	-		Echvi_1990	0.79	-2.2
2,344,895	-		Echvi_1990	0.79	-0.8
2,344,905	-		Echvi_1990	0.82	+0.4
2,344,914	+		Echvi_1990	0.85	-0.8
2,344,914	+		Echvi_1990	0.85	+0.4
2,344,915	-		Echvi_1990	0.85	-0.7
2,344,917	+		Echvi_1990	0.85	-0.6
2,344,917	+		Echvi_1990	0.85	+0.1
2,344,918	-		Echvi_1990	0.86	+0.1
2,344,924	+		Echvi_1990	0.87	+0.0
2,344,957	-				+0.7
2,344,979	+				+0.2
2,345,005	-				-0.1
2,345,011	-				-0.6
2,345,021	-				+0.9
2,345,021	-				+0.4
2,345,070	+				+0.1
2,345,071	-				+0.6
2,345,092	+				-0.4
2,345,093	-				+0.3
2,345,093	-				+0.4
2,345,093	-				-0.4
2,345,096	+				+0.9
2,345,096	+				-1.5
2,345,115	+				+1.3
2,345,128	-				+0.4
2,345,134	-				-1.7
2,345,186	-				+0.2
2,345,217	+				+1.5
2,345,222	+				+0.4
2,345,222	+				+1.3
2,345,224	+				+1.2
2,345,265	+				-0.3
2,345,275	+				+1.0
2,345,275	+				-2.6
2,345,276	-				+0.2
2,345,298	+				-0.0
2,345,384	+				-0.1
2,345,384	+				-0.9
2,345,434	-				+0.9
2,345,512	+				-0.5
2,345,543	-				+0.7