Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0698 and Echvi_0699 are separated by 677 nucleotides Echvi_0699 and Echvi_0700 are separated by 492 nucleotides
Echvi_0698: Echvi_0698 - Transcriptional regulators, at 788,784 to 789,800
_0698
Echvi_0699: Echvi_0699 - Transposase and inactivated derivatives, at 790,478 to 791,467
_0699
Echvi_0700: Echvi_0700 - Predicted aminopeptidases, at 791,960 to 792,922
_0700
Position (kb)
790
791
792 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 789.520 kb on + strand, within Echvi_0698 at 789.617 kb on + strand, within Echvi_0698 at 789.655 kb on + strand, within Echvi_0698 at 789.750 kb on - strand at 789.750 kb on - strand at 789.750 kb on - strand at 789.782 kb on + strand at 789.827 kb on + strand at 789.827 kb on + strand at 789.829 kb on + strand at 789.829 kb on + strand at 789.830 kb on - strand at 789.901 kb on + strand at 789.901 kb on + strand at 789.951 kb on - strand at 789.983 kb on - strand at 790.017 kb on + strand at 790.018 kb on - strand at 790.116 kb on - strand at 790.168 kb on + strand at 790.186 kb on - strand at 790.186 kb on - strand at 790.186 kb on - strand at 790.202 kb on - strand at 791.600 kb on + strand at 791.646 kb on + strand at 791.647 kb on - strand at 791.647 kb on - strand at 791.691 kb on + strand at 791.759 kb on - strand at 791.759 kb on - strand at 791.814 kb on - strand at 791.835 kb on - strand at 791.874 kb on + strand at 791.953 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 789,520 + Echvi_0698 0.72 -2.0 789,617 + Echvi_0698 0.82 +0.7 789,655 + Echvi_0698 0.86 -0.6 789,750 - -1.7 789,750 - -0.6 789,750 - +0.0 789,782 + +0.9 789,827 + +3.8 789,827 + -1.9 789,829 + -0.1 789,829 + -0.1 789,830 - +2.0 789,901 + +1.0 789,901 + +0.6 789,951 - -1.3 789,983 - -0.8 790,017 + -1.3 790,018 - -0.2 790,116 - -2.1 790,168 + -0.3 790,186 - -0.3 790,186 - +0.7 790,186 - +0.2 790,202 - -0.1 791,600 + +2.1 791,646 + +0.7 791,647 - -2.7 791,647 - -0.0 791,691 + -0.3 791,759 - +0.2 791,759 - +0.3 791,814 - +2.6 791,835 - +0.3 791,874 + +0.2 791,953 + +0.7
Or see this region's nucleotide sequence