Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0477 and Echvi_0478 are separated by 101 nucleotides Echvi_0478 and Echvi_0479 are separated by 309 nucleotides
Echvi_0477: Echvi_0477 - Exopolyphosphatase, at 523,306 to 524,853
_0477
Echvi_0478: Echvi_0478 - 6-phosphogluconate dehydrogenase, decarboxylating, at 524,955 to 526,865
_0478
Echvi_0479: Echvi_0479 - Predicted dehydrogenases and related proteins, at 527,175 to 528,251
_0479
Position (kb) 524
525
526
527 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 523.981 kb on + strand, within Echvi_0477 at 523.981 kb on + strand, within Echvi_0477 at 523.981 kb on + strand, within Echvi_0477 at 523.981 kb on + strand, within Echvi_0477 at 523.981 kb on + strand, within Echvi_0477 at 523.981 kb on + strand, within Echvi_0477 at 523.982 kb on - strand, within Echvi_0477 at 523.982 kb on - strand, within Echvi_0477 at 523.982 kb on - strand, within Echvi_0477 at 524.059 kb on - strand, within Echvi_0477 at 524.123 kb on - strand, within Echvi_0477 at 524.162 kb on - strand, within Echvi_0477 at 524.317 kb on - strand, within Echvi_0477 at 524.333 kb on - strand, within Echvi_0477 at 524.571 kb on + strand, within Echvi_0477 at 524.656 kb on + strand, within Echvi_0477 at 524.662 kb on + strand, within Echvi_0477 at 524.662 kb on + strand, within Echvi_0477 at 524.662 kb on + strand, within Echvi_0477 at 524.667 kb on - strand, within Echvi_0477 at 524.683 kb on + strand, within Echvi_0477 at 524.683 kb on + strand, within Echvi_0477 at 524.696 kb on + strand, within Echvi_0477 at 524.696 kb on + strand, within Echvi_0477 at 524.697 kb on - strand, within Echvi_0477 at 524.697 kb on - strand, within Echvi_0477 at 524.766 kb on + strand at 524.766 kb on + strand at 524.766 kb on + strand at 524.770 kb on + strand at 524.770 kb on + strand at 524.770 kb on + strand at 524.771 kb on - strand at 524.771 kb on - strand at 524.771 kb on - strand at 524.771 kb on - strand at 524.771 kb on - strand at 524.833 kb on - strand at 524.837 kb on - strand at 524.837 kb on - strand at 524.837 kb on - strand at 524.880 kb on - strand at 524.899 kb on - strand at 524.903 kb on - strand at 524.918 kb on + strand at 524.918 kb on + strand at 524.922 kb on + strand at 524.922 kb on + strand at 524.922 kb on + strand at 525.060 kb on + strand at 525.060 kb on + strand at 525.162 kb on + strand, within Echvi_0478 at 525.162 kb on + strand, within Echvi_0478 at 525.243 kb on + strand, within Echvi_0478 at 525.244 kb on - strand, within Echvi_0478 at 525.400 kb on + strand, within Echvi_0478 at 525.400 kb on + strand, within Echvi_0478 at 525.400 kb on + strand, within Echvi_0478 at 525.400 kb on + strand, within Echvi_0478 at 525.498 kb on - strand, within Echvi_0478 at 525.563 kb on + strand, within Echvi_0478 at 525.676 kb on + strand, within Echvi_0478 at 525.677 kb on - strand, within Echvi_0478 at 525.783 kb on + strand, within Echvi_0478 at 525.783 kb on + strand, within Echvi_0478 at 525.784 kb on - strand, within Echvi_0478 at 525.784 kb on - strand, within Echvi_0478 at 525.784 kb on - strand, within Echvi_0478 at 525.793 kb on + strand, within Echvi_0478 at 525.793 kb on + strand, within Echvi_0478 at 525.794 kb on - strand, within Echvi_0478 at 525.850 kb on + strand, within Echvi_0478 at 525.850 kb on + strand, within Echvi_0478 at 525.850 kb on + strand, within Echvi_0478 at 525.850 kb on + strand, within Echvi_0478 at 525.858 kb on - strand, within Echvi_0478 at 525.858 kb on - strand, within Echvi_0478 at 525.858 kb on - strand, within Echvi_0478 at 525.875 kb on + strand, within Echvi_0478 at 525.960 kb on + strand, within Echvi_0478 at 526.024 kb on + strand, within Echvi_0478 at 526.025 kb on - strand, within Echvi_0478 at 526.071 kb on + strand, within Echvi_0478 at 526.071 kb on + strand, within Echvi_0478 at 526.213 kb on - strand, within Echvi_0478 at 526.267 kb on - strand, within Echvi_0478 at 526.267 kb on - strand, within Echvi_0478 at 526.296 kb on + strand, within Echvi_0478 at 526.302 kb on + strand, within Echvi_0478 at 526.374 kb on + strand, within Echvi_0478 at 526.403 kb on + strand, within Echvi_0478 at 526.413 kb on + strand, within Echvi_0478 at 526.413 kb on + strand, within Echvi_0478 at 526.414 kb on - strand, within Echvi_0478 at 526.419 kb on - strand, within Echvi_0478 at 526.443 kb on + strand, within Echvi_0478 at 526.443 kb on + strand, within Echvi_0478 at 526.491 kb on + strand, within Echvi_0478 at 526.508 kb on + strand, within Echvi_0478 at 526.508 kb on + strand, within Echvi_0478 at 526.509 kb on - strand, within Echvi_0478 at 526.509 kb on - strand, within Echvi_0478 at 526.510 kb on + strand, within Echvi_0478 at 526.510 kb on + strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.511 kb on - strand, within Echvi_0478 at 526.532 kb on + strand, within Echvi_0478 at 526.532 kb on + strand, within Echvi_0478 at 526.854 kb on + strand at 526.914 kb on + strand at 526.914 kb on + strand at 526.914 kb on + strand at 526.954 kb on + strand at 526.997 kb on + strand at 527.055 kb on - strand at 527.055 kb on - strand at 527.055 kb on - strand at 527.072 kb on - strand at 527.140 kb on + strand at 527.141 kb on - strand at 527.217 kb on - strand at 527.217 kb on - strand at 527.348 kb on + strand, within Echvi_0479 at 527.348 kb on + strand, within Echvi_0479 at 527.349 kb on - strand, within Echvi_0479 at 527.349 kb on - strand, within Echvi_0479 at 527.393 kb on + strand, within Echvi_0479 at 527.393 kb on + strand, within Echvi_0479 at 527.394 kb on - strand, within Echvi_0479 at 527.394 kb on - strand, within Echvi_0479 at 527.419 kb on - strand, within Echvi_0479 at 527.477 kb on + strand, within Echvi_0479 at 527.478 kb on - strand, within Echvi_0479 at 527.482 kb on + strand, within Echvi_0479 at 527.545 kb on - strand, within Echvi_0479 at 527.545 kb on - strand, within Echvi_0479 at 527.545 kb on - strand, within Echvi_0479 at 527.547 kb on - strand, within Echvi_0479 at 527.715 kb on + strand, within Echvi_0479 at 527.715 kb on + strand, within Echvi_0479 at 527.715 kb on + strand, within Echvi_0479 at 527.716 kb on - strand, within Echvi_0479 at 527.793 kb on - strand, within Echvi_0479 at 527.808 kb on + strand, within Echvi_0479 at 527.809 kb on - strand, within Echvi_0479 at 527.809 kb on - strand, within Echvi_0479 at 527.810 kb on + strand, within Echvi_0479 at 527.810 kb on + strand, within Echvi_0479 at 527.815 kb on - strand, within Echvi_0479
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 523,981 + Echvi_0477 0.44 -0.5 523,981 + Echvi_0477 0.44 -0.2 523,981 + Echvi_0477 0.44 +0.0 523,981 + Echvi_0477 0.44 -1.0 523,981 + Echvi_0477 0.44 -0.4 523,981 + Echvi_0477 0.44 +0.8 523,982 - Echvi_0477 0.44 +0.3 523,982 - Echvi_0477 0.44 +1.4 523,982 - Echvi_0477 0.44 -0.9 524,059 - Echvi_0477 0.49 -1.1 524,123 - Echvi_0477 0.53 +3.0 524,162 - Echvi_0477 0.55 +0.4 524,317 - Echvi_0477 0.65 +1.5 524,333 - Echvi_0477 0.66 -1.1 524,571 + Echvi_0477 0.82 +0.6 524,656 + Echvi_0477 0.87 -1.2 524,662 + Echvi_0477 0.88 +0.1 524,662 + Echvi_0477 0.88 +0.4 524,662 + Echvi_0477 0.88 +1.2 524,667 - Echvi_0477 0.88 -3.4 524,683 + Echvi_0477 0.89 +0.8 524,683 + Echvi_0477 0.89 +0.9 524,696 + Echvi_0477 0.90 -3.0 524,696 + Echvi_0477 0.90 -0.8 524,697 - Echvi_0477 0.90 -0.4 524,697 - Echvi_0477 0.90 -0.6 524,766 + -1.1 524,766 + +0.4 524,766 + +1.9 524,770 + +1.1 524,770 + +1.5 524,770 + +0.5 524,771 - -0.7 524,771 - -0.7 524,771 - +1.0 524,771 - +1.3 524,771 - +0.5 524,833 - -1.2 524,837 - -0.7 524,837 - +0.9 524,837 - -2.5 524,880 - +1.8 524,899 - -0.1 524,903 - +0.0 524,918 + +0.7 524,918 + +0.2 524,922 + +0.8 524,922 + +0.1 524,922 + -0.7 525,060 + -0.2 525,060 + -1.1 525,162 + Echvi_0478 0.11 +2.1 525,162 + Echvi_0478 0.11 -1.3 525,243 + Echvi_0478 0.15 -0.6 525,244 - Echvi_0478 0.15 +0.5 525,400 + Echvi_0478 0.23 -1.5 525,400 + Echvi_0478 0.23 -1.8 525,400 + Echvi_0478 0.23 +0.9 525,400 + Echvi_0478 0.23 -0.6 525,498 - Echvi_0478 0.28 -0.2 525,563 + Echvi_0478 0.32 +1.5 525,676 + Echvi_0478 0.38 +0.8 525,677 - Echvi_0478 0.38 -1.0 525,783 + Echvi_0478 0.43 -0.7 525,783 + Echvi_0478 0.43 -0.2 525,784 - Echvi_0478 0.43 +2.1 525,784 - Echvi_0478 0.43 -1.2 525,784 - Echvi_0478 0.43 -2.0 525,793 + Echvi_0478 0.44 -0.6 525,793 + Echvi_0478 0.44 -1.3 525,794 - Echvi_0478 0.44 -0.7 525,850 + Echvi_0478 0.47 +1.9 525,850 + Echvi_0478 0.47 -0.3 525,850 + Echvi_0478 0.47 +0.1 525,850 + Echvi_0478 0.47 -0.5 525,858 - Echvi_0478 0.47 +0.0 525,858 - Echvi_0478 0.47 -0.6 525,858 - Echvi_0478 0.47 +0.4 525,875 + Echvi_0478 0.48 +0.3 525,960 + Echvi_0478 0.53 +1.0 526,024 + Echvi_0478 0.56 -0.3 526,025 - Echvi_0478 0.56 -0.2 526,071 + Echvi_0478 0.58 -2.1 526,071 + Echvi_0478 0.58 +2.1 526,213 - Echvi_0478 0.66 -0.3 526,267 - Echvi_0478 0.69 -1.0 526,267 - Echvi_0478 0.69 -0.2 526,296 + Echvi_0478 0.70 +0.1 526,302 + Echvi_0478 0.70 -1.2 526,374 + Echvi_0478 0.74 -1.2 526,403 + Echvi_0478 0.76 -0.3 526,413 + Echvi_0478 0.76 -0.2 526,413 + Echvi_0478 0.76 +1.6 526,414 - Echvi_0478 0.76 +0.2 526,419 - Echvi_0478 0.77 -1.3 526,443 + Echvi_0478 0.78 +0.4 526,443 + Echvi_0478 0.78 +0.1 526,491 + Echvi_0478 0.80 +0.5 526,508 + Echvi_0478 0.81 +2.6 526,508 + Echvi_0478 0.81 +1.0 526,509 - Echvi_0478 0.81 -0.8 526,509 - Echvi_0478 0.81 -1.2 526,510 + Echvi_0478 0.81 -0.6 526,510 + Echvi_0478 0.81 +0.7 526,511 - Echvi_0478 0.81 -1.2 526,511 - Echvi_0478 0.81 -1.2 526,511 - Echvi_0478 0.81 -0.2 526,511 - Echvi_0478 0.81 -2.0 526,511 - Echvi_0478 0.81 -0.5 526,511 - Echvi_0478 0.81 -3.3 526,511 - Echvi_0478 0.81 -2.9 526,511 - Echvi_0478 0.81 -0.3 526,532 + Echvi_0478 0.83 -0.8 526,532 + Echvi_0478 0.83 -1.6 526,854 + -1.2 526,914 + -0.3 526,914 + +0.1 526,914 + +0.4 526,954 + +1.3 526,997 + -0.3 527,055 - +1.8 527,055 - +1.0 527,055 - +0.4 527,072 - -1.4 527,140 + +1.6 527,141 - -0.1 527,217 - +1.5 527,217 - +0.5 527,348 + Echvi_0479 0.16 +0.1 527,348 + Echvi_0479 0.16 -1.1 527,349 - Echvi_0479 0.16 -0.9 527,349 - Echvi_0479 0.16 +2.1 527,393 + Echvi_0479 0.20 +0.2 527,393 + Echvi_0479 0.20 -0.2 527,394 - Echvi_0479 0.20 +0.2 527,394 - Echvi_0479 0.20 -0.5 527,419 - Echvi_0479 0.23 -0.5 527,477 + Echvi_0479 0.28 -2.3 527,478 - Echvi_0479 0.28 +2.9 527,482 + Echvi_0479 0.29 +0.9 527,545 - Echvi_0479 0.34 +0.5 527,545 - Echvi_0479 0.34 +0.2 527,545 - Echvi_0479 0.34 -2.2 527,547 - Echvi_0479 0.35 -0.1 527,715 + Echvi_0479 0.50 -0.5 527,715 + Echvi_0479 0.50 +0.8 527,715 + Echvi_0479 0.50 -0.7 527,716 - Echvi_0479 0.50 +0.9 527,793 - Echvi_0479 0.57 -1.6 527,808 + Echvi_0479 0.59 -1.1 527,809 - Echvi_0479 0.59 -3.0 527,809 - Echvi_0479 0.59 -0.5 527,810 + Echvi_0479 0.59 +2.4 527,810 + Echvi_0479 0.59 +1.4 527,815 - Echvi_0479 0.59 +0.4
Or see this region's nucleotide sequence