Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04740

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04735 and CA264_04740 are separated by 597 nucleotidesCA264_04740 and CA264_04745 are separated by 150 nucleotides CA264_04735: CA264_04735 - hypothetical protein, at 1,095,548 to 1,097,092 _04735 CA264_04740: CA264_04740 - arsenate reductase (glutaredoxin), at 1,097,690 to 1,098,031 _04740 CA264_04745: CA264_04745 - S26 family signal peptidase, at 1,098,182 to 1,099,288 _04745 Position (kb) 1097 1098 1099Strain fitness (log2 ratio) -2 -1 0 1 2at 1096.769 kb on - strand, within CA264_04735at 1096.802 kb on + strand, within CA264_04735at 1096.833 kb on + strand, within CA264_04735at 1096.922 kb on + strand, within CA264_04735at 1096.922 kb on + strand, within CA264_04735at 1096.923 kb on - strand, within CA264_04735at 1097.111 kb on - strandat 1097.132 kb on - strandat 1097.163 kb on + strandat 1097.163 kb on + strandat 1097.359 kb on + strandat 1097.405 kb on + strandat 1097.456 kb on + strandat 1097.505 kb on + strandat 1097.508 kb on + strandat 1097.550 kb on + strandat 1097.700 kb on + strandat 1097.702 kb on + strandat 1097.702 kb on + strandat 1097.719 kb on + strandat 1097.720 kb on - strandat 1097.720 kb on - strandat 1097.770 kb on - strand, within CA264_04740at 1097.879 kb on + strand, within CA264_04740at 1098.029 kb on + strandat 1098.029 kb on + strandat 1098.030 kb on - strandat 1098.030 kb on - strandat 1098.030 kb on - strandat 1098.034 kb on + strandat 1098.035 kb on - strandat 1098.048 kb on + strandat 1098.054 kb on + strandat 1098.118 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,096,769 - CA264_04735 0.79 -0.0
1,096,802 + CA264_04735 0.81 +0.1
1,096,833 + CA264_04735 0.83 +1.0
1,096,922 + CA264_04735 0.89 +0.2
1,096,922 + CA264_04735 0.89 -0.5
1,096,923 - CA264_04735 0.89 +0.1
1,097,111 - +0.4
1,097,132 - +0.1
1,097,163 + +0.7
1,097,163 + -0.1
1,097,359 + -1.9
1,097,405 + +0.6
1,097,456 + +1.8
1,097,505 + +0.9
1,097,508 + +0.6
1,097,550 + -0.1
1,097,700 + -0.8
1,097,702 + -0.5
1,097,702 + -0.4
1,097,719 + +0.1
1,097,720 - +0.3
1,097,720 - -0.5
1,097,770 - CA264_04740 0.23 +0.0
1,097,879 + CA264_04740 0.55 -1.2
1,098,029 + -1.1
1,098,029 + -0.9
1,098,030 - -0.2
1,098,030 - -0.4
1,098,030 - +0.1
1,098,034 + +0.2
1,098,035 - -0.4
1,098,048 + -0.3
1,098,054 + -0.0
1,098,118 - -0.3

Or see this region's nucleotide sequence