Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02545 and CA264_02550 are separated by 116 nucleotides CA264_02550 and CA264_02555 are separated by 633 nucleotides
CA264_02545: CA264_02545 - sulfate adenylyltransferase small subunit, at 594,866 to 595,774
_02545
CA264_02550: CA264_02550 - phosphoadenosine phosphosulfate reductase, at 595,891 to 596,610
_02550
CA264_02555: CA264_02555 - hypothetical protein, at 597,244 to 597,963
_02555
Position (kb) 595
596
597 Strain fitness (log2 ratio) -2
-1
0
1 at 594.916 kb on + strand at 594.985 kb on + strand, within CA264_02545 at 595.147 kb on - strand, within CA264_02545 at 595.472 kb on + strand, within CA264_02545 at 595.797 kb on - strand at 595.810 kb on + strand at 595.832 kb on - strand at 595.841 kb on - strand at 595.864 kb on - strand at 595.888 kb on + strand at 595.892 kb on + strand at 595.893 kb on - strand at 596.066 kb on - strand, within CA264_02550 at 596.104 kb on - strand, within CA264_02550 at 596.615 kb on + strand at 596.623 kb on - strand at 596.623 kb on - strand at 596.667 kb on + strand at 596.667 kb on + strand at 596.669 kb on + strand at 596.670 kb on - strand at 596.708 kb on - strand at 596.723 kb on + strand at 596.723 kb on + strand at 596.789 kb on + strand at 596.790 kb on - strand at 596.904 kb on + strand at 596.905 kb on - strand at 596.905 kb on - strand at 596.912 kb on + strand at 596.913 kb on - strand at 596.913 kb on - strand at 596.975 kb on - strand at 596.980 kb on - strand at 597.010 kb on - strand at 597.115 kb on + strand at 597.190 kb on + strand at 597.271 kb on + strand at 597.376 kb on + strand, within CA264_02555 at 597.467 kb on + strand, within CA264_02555 at 597.467 kb on + strand, within CA264_02555 at 597.500 kb on + strand, within CA264_02555 at 597.500 kb on + strand, within CA264_02555 at 597.500 kb on + strand, within CA264_02555 at 597.501 kb on - strand, within CA264_02555 at 597.501 kb on - strand, within CA264_02555 at 597.501 kb on - strand, within CA264_02555 at 597.525 kb on - strand, within CA264_02555
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 594,916 + -0.7 594,985 + CA264_02545 0.13 -2.0 595,147 - CA264_02545 0.31 -1.7 595,472 + CA264_02545 0.67 -2.5 595,797 - -0.9 595,810 + -0.4 595,832 - +0.1 595,841 - +0.9 595,864 - -0.1 595,888 + +0.1 595,892 + -0.4 595,893 - -0.5 596,066 - CA264_02550 0.24 +0.4 596,104 - CA264_02550 0.30 -0.9 596,615 + -1.7 596,623 - +0.0 596,623 - -0.1 596,667 + -1.2 596,667 + +0.0 596,669 + -0.2 596,670 - -0.6 596,708 - -1.4 596,723 + -0.7 596,723 + -1.0 596,789 + -0.3 596,790 - -0.8 596,904 + -2.2 596,905 - -0.8 596,905 - +0.2 596,912 + +0.0 596,913 - +0.3 596,913 - -0.7 596,975 - +0.1 596,980 - -0.8 597,010 - -0.2 597,115 + +0.0 597,190 + +0.6 597,271 + -1.7 597,376 + CA264_02555 0.18 -0.9 597,467 + CA264_02555 0.31 +0.2 597,467 + CA264_02555 0.31 +1.6 597,500 + CA264_02555 0.36 +0.5 597,500 + CA264_02555 0.36 +0.7 597,500 + CA264_02555 0.36 -0.5 597,501 - CA264_02555 0.36 -0.8 597,501 - CA264_02555 0.36 -0.1 597,501 - CA264_02555 0.36 -1.1 597,525 - CA264_02555 0.39 -0.4
Or see this region's nucleotide sequence