Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02920 and PS417_02925 overlap by 4 nucleotides PS417_02925 and PS417_02930 are separated by 163 nucleotides
PS417_02920: PS417_02920 - hypothetical protein, at 666,381 to 667,160
_02920
PS417_02925: PS417_02925 - membrane protein, at 667,157 to 667,753
_02925
PS417_02930: PS417_02930 - histidine kinase, at 667,917 to 670,688
_02930
Position (kb) 667
668 Strain fitness (log2 ratio) -1
0
1
2
3 at 666.335 kb on + strand at 666.336 kb on - strand at 666.347 kb on - strand at 666.347 kb on - strand at 666.347 kb on - strand at 666.347 kb on - strand at 666.378 kb on - strand at 666.410 kb on + strand at 666.438 kb on + strand at 666.568 kb on - strand, within PS417_02920 at 666.575 kb on + strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.583 kb on - strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.600 kb on + strand, within PS417_02920 at 666.601 kb on - strand, within PS417_02920 at 666.601 kb on - strand, within PS417_02920 at 666.601 kb on - strand, within PS417_02920 at 666.759 kb on - strand, within PS417_02920 at 666.811 kb on + strand, within PS417_02920 at 666.856 kb on + strand, within PS417_02920 at 666.969 kb on + strand, within PS417_02920 at 666.970 kb on - strand, within PS417_02920 at 666.970 kb on - strand, within PS417_02920 at 666.997 kb on + strand, within PS417_02920 at 666.998 kb on - strand, within PS417_02920 at 667.454 kb on + strand, within PS417_02925 at 667.455 kb on - strand, within PS417_02925 at 667.455 kb on - strand, within PS417_02925 at 667.455 kb on - strand, within PS417_02925 at 667.455 kb on - strand, within PS417_02925 at 667.588 kb on - strand, within PS417_02925 at 667.679 kb on - strand, within PS417_02925 at 667.708 kb on - strand at 667.848 kb on + strand at 667.848 kb on + strand at 667.911 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.025 mg/ml remove 666,335 + -1.1 666,336 - -0.4 666,347 - -0.5 666,347 - +0.0 666,347 - -0.1 666,347 - +0.1 666,378 - -0.3 666,410 + -0.4 666,438 + -0.2 666,568 - PS417_02920 0.24 +2.0 666,575 + PS417_02920 0.25 +0.7 666,583 - PS417_02920 0.26 +0.2 666,583 - PS417_02920 0.26 +1.3 666,583 - PS417_02920 0.26 -0.2 666,583 - PS417_02920 0.26 +0.0 666,583 - PS417_02920 0.26 -0.4 666,600 + PS417_02920 0.28 -0.5 666,600 + PS417_02920 0.28 -0.1 666,600 + PS417_02920 0.28 -0.3 666,600 + PS417_02920 0.28 -0.9 666,601 - PS417_02920 0.28 -0.5 666,601 - PS417_02920 0.28 +0.7 666,601 - PS417_02920 0.28 +0.0 666,759 - PS417_02920 0.48 +3.3 666,811 + PS417_02920 0.55 +0.0 666,856 + PS417_02920 0.61 -1.4 666,969 + PS417_02920 0.75 -0.7 666,970 - PS417_02920 0.76 -0.2 666,970 - PS417_02920 0.76 +0.4 666,997 + PS417_02920 0.79 -0.6 666,998 - PS417_02920 0.79 +0.3 667,454 + PS417_02925 0.50 +0.6 667,455 - PS417_02925 0.50 +1.3 667,455 - PS417_02925 0.50 +0.5 667,455 - PS417_02925 0.50 +1.7 667,455 - PS417_02925 0.50 +0.4 667,588 - PS417_02925 0.72 +0.1 667,679 - PS417_02925 0.87 -0.1 667,708 - -0.3 667,848 + -0.2 667,848 + -0.1 667,911 + +0.9
Or see this region's nucleotide sequence