Strain Fitness in Pseudomonas simiae WCS417 around PS417_28085

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
6,060,591	+		PS417_28080	0.65	-3.2
6,060,591	+		PS417_28080	0.65	-2.6
6,060,592	-		PS417_28080	0.65	-1.9
6,060,592	-		PS417_28080	0.65	-0.4
6,060,889	+		PS417_28080	0.78	-3.4
6,060,889	+		PS417_28080	0.78	-3.6
6,060,890	-		PS417_28080	0.78	-2.9
6,060,890	-		PS417_28080	0.78	-0.6
6,060,890	-		PS417_28080	0.78	-1.6
6,060,891	+		PS417_28080	0.78	-3.2
6,060,891	+		PS417_28080	0.78	-0.5
6,060,891	+		PS417_28080	0.78	-1.4
6,060,891	+				+0.1
6,060,891	+		PS417_28080	0.78	-2.8
6,060,892	-				+0.1
6,060,892	-		PS417_28080	0.78	-1.7
6,060,892	-		PS417_28080	0.78	-3.5
6,060,892	-		PS417_28080	0.78	-3.3
6,060,892	-		PS417_28080	0.78	-2.8
6,060,892	-		PS417_28080	0.78	-3.6
6,060,892	-		PS417_28080	0.78	-1.8
6,060,892	-		PS417_28080	0.78	-2.4
6,060,892	-		PS417_28080	0.78	-3.1
6,060,892	-		PS417_28080	0.78	-3.9
6,061,039	+		PS417_28080	0.85	-4.4
6,061,039	+		PS417_28080	0.85	-2.9
6,061,198	-				-2.7
6,061,260	+				-1.9
6,061,260	+				-2.9
6,061,260	+				-3.1
6,061,260	+				-3.1
6,061,261	-				-2.0
6,061,261	-				-2.9
6,061,584	+				-0.5
6,061,584	+				+0.3
6,061,714	-		PS417_28085	0.20	-2.6
6,061,714	-		PS417_28085	0.20	-0.4
6,061,806	+		PS417_28085	0.29	-0.2
6,061,806	+		PS417_28085	0.29	-3.3
6,061,900	-		PS417_28085	0.39	-2.2
6,061,900	-		PS417_28085	0.39	-3.0
6,061,900	-		PS417_28085	0.39	-3.8
6,061,932	+		PS417_28085	0.42	-2.6
6,061,932	+		PS417_28085	0.42	-0.7
6,061,933	-		PS417_28085	0.42	-1.0
6,061,939	-		PS417_28085	0.43	-2.4
6,061,939	-		PS417_28085	0.43	-1.7
6,062,163	+		PS417_28085	0.65	-3.3
6,062,163	+		PS417_28085	0.65	-0.4
6,062,164	-		PS417_28085	0.66	-0.7
6,062,398	+		PS417_28085	0.89	-3.9
6,062,404	-		PS417_28085	0.90	-2.1
6,062,404	-		PS417_28085	0.90	-2.8
6,062,527	+				-1.3
6,062,527	+				-1.7
6,062,527	+				-2.2
6,062,527	+				-1.4
6,062,570	+				-0.4
6,062,570	+				+1.1
6,062,570	+				-0.5
6,062,571	-				+1.5
6,062,590	+				-0.2
6,062,705	+				-0.3
6,062,747	+				+0.6
6,062,748	-				+0.0
6,062,751	-				-0.1
6,062,751	-				+1.7
6,062,822	+		PS417_28090	0.11	+0.3
6,063,335	+		PS417_28090	0.51	-0.4
6,063,336	-		PS417_28090	0.51	+1.6
6,063,336	-		PS417_28090	0.51	-0.2
6,063,412	-		PS417_28090	0.57	+0.0
6,063,413	+		PS417_28090	0.57	+0.5
6,063,413	+		PS417_28090	0.57	+0.6