Strain Fitness in Pseudomonas simiae WCS417 around PS417_27425

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
5,915,937	+		PS417_27420	0.35	-0.7
5,915,938	-		PS417_27420	0.35	-1.1
5,915,988	-		PS417_27420	0.43	+2.2
5,916,026	+		PS417_27420	0.49	+0.1
5,916,026	+		PS417_27420	0.49	-0.6
5,916,026	+		PS417_27420	0.49	-0.3
5,916,027	-		PS417_27420	0.49	+0.6
5,916,237	+		PS417_27420	0.81	+0.5
5,916,262	-		PS417_27420	0.85	+0.4
5,916,271	+		PS417_27420	0.86	+0.4
5,916,272	-		PS417_27420	0.86	-0.0
5,916,360	+				-1.3
5,916,361	-				+0.2
5,916,427	+				-0.6
5,916,441	-				-0.6
5,916,517	-				+0.0
5,916,650	+				+0.2
5,916,667	+				+1.1
5,916,802	-				-1.1
5,917,177	+		PS417_27425	0.25	-0.5
5,917,177	+		PS417_27425	0.25	-1.2
5,917,177	+		PS417_27425	0.25	-0.1
5,917,177	+		PS417_27425	0.25	-0.0
5,917,177	+		PS417_27425	0.25	-1.3
5,917,177	+		PS417_27425	0.25	-1.3
5,917,177	+		PS417_27425	0.25	-0.7
5,917,177	+		PS417_27425	0.25	-0.8
5,917,178	-		PS417_27425	0.25	+0.1
5,917,178	-		PS417_27425	0.25	-1.2
5,917,178	-		PS417_27425	0.25	+0.1
5,917,178	-		PS417_27425	0.25	-0.6
5,917,178	-		PS417_27425	0.25	-1.9
5,917,181	+		PS417_27425	0.25	-1.2
5,917,182	-		PS417_27425	0.25	-2.3
5,917,194	+		PS417_27425	0.26	-2.0
5,917,318	+		PS417_27425	0.34	-0.8
5,917,318	+		PS417_27425	0.34	-1.3
5,917,375	+		PS417_27425	0.38	+0.1
5,917,376	-		PS417_27425	0.38	-0.9
5,917,711	+		PS417_27425	0.60	+0.1
5,917,711	+		PS417_27425	0.60	-1.3
5,917,712	-		PS417_27425	0.60	+0.3
5,917,712	-				-0.5
5,917,712	-		PS417_27425	0.60	-1.2
5,917,721	+		PS417_27425	0.61	+0.1
5,918,043	+		PS417_27425	0.82	-0.9
5,918,044	-		PS417_27425	0.82	+2.2
5,918,316	-				+0.7
5,918,327	+				-0.4
5,918,327	+				-2.1
5,918,327	+				+0.1
5,918,327	+				-0.0
5,918,327	+				-0.2
5,918,327	+				-0.5
5,918,328	-				-0.1
5,918,328	-				-0.3
5,918,328	-				+0.6
5,918,328	-				-0.1
5,918,328	-				-0.4
5,918,379	+				-0.4
5,918,396	-				-1.6
5,918,484	+				+0.5
5,918,499	+				+0.4
5,918,517	+				-0.5
5,918,637	-				+0.2
5,918,695	-				+0.6
5,918,695	-				+0.1
5,918,695	-				-0.1
5,918,988	+		PS417_27430	0.32	-0.9
5,919,001	-		PS417_27430	0.33	+0.3
5,919,068	+		PS417_27430	0.38	+0.8
5,919,068	+		PS417_27430	0.38	+1.1
5,919,069	-		PS417_27430	0.38	-0.5
5,919,069	-		PS417_27430	0.38	-0.1
5,919,069	-		PS417_27430	0.38	-0.5
5,919,102	-		PS417_27430	0.41	-1.7
5,919,267	-		PS417_27430	0.54	-0.3