Strain Fitness in Pseudomonas simiae WCS417 around PS417_27315

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
5,892,416	+				+0.1
5,892,417	+				-0.4
5,892,579	+		PS417_27305	0.24	-0.2
5,892,580	-		PS417_27305	0.24	+0.6
5,892,589	+		PS417_27305	0.25	-0.4
5,892,589	+		PS417_27305	0.25	-0.3
5,892,590	-		PS417_27305	0.25	-0.4
5,892,593	+		PS417_27305	0.26	-1.0
5,892,661	+		PS417_27305	0.37	+0.7
5,892,662	-		PS417_27305	0.37	-0.9
5,892,662	-		PS417_27305	0.37	-1.7
5,892,662	-		PS417_27305	0.37	-0.3
5,892,872	-		PS417_27305	0.70	-0.3
5,892,889	+		PS417_27305	0.73	-1.2
5,893,012	-				+1.0
5,893,021	+				+0.2
5,893,021	+				+0.5
5,893,022	-				+0.4
5,893,134	+				-0.2
5,893,147	+				-1.4
5,893,198	-				-0.2
5,893,198	-				-0.0
5,893,198	-				+0.7
5,893,209	-				+0.7
5,893,209	-				-0.8
5,893,244	-				+0.2
5,893,244	-				-0.9
5,893,295	+				+0.1
5,893,560	+		PS417_27315	0.33	+0.1
5,893,657	-		PS417_27315	0.54	+0.9
5,894,161	+		PS417_27320	0.24	+0.3
5,894,162	-		PS417_27320	0.24	+0.5
5,894,222	-		PS417_27320	0.30	+0.9
5,894,325	+		PS417_27320	0.41	+0.4
5,894,326	-		PS417_27320	0.41	+0.9
5,894,326	-		PS417_27320	0.41	-0.5
5,894,326	-		PS417_27320	0.41	-0.1
5,894,419	+		PS417_27320	0.50	+1.1
5,894,573	-		PS417_27320	0.66	+0.3
5,894,601	+		PS417_27320	0.69	-0.1
5,894,601	+		PS417_27320	0.69	-0.2
5,894,602	-		PS417_27320	0.69	-0.2
5,894,716	+		PS417_27320	0.81	-1.2