Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26150 and PS417_26155 overlap by 4 nucleotides PS417_26155 and PS417_26160 are separated by 136 nucleotides PS417_26160 and PS417_26165 are separated by 75 nucleotides
PS417_26150: PS417_26150 - acyltransferase, at 5,650,908 to 5,651,795
_26150
PS417_26155: PS417_26155 - hypothetical protein, at 5,651,792 to 5,652,364
_26155
PS417_26160: PS417_26160 - hypothetical protein, at 5,652,501 to 5,652,959
_26160
PS417_26165: PS417_26165 - aldehyde dismutase, at 5,653,035 to 5,654,234
_26165
Position (kb) 5651
5652
5653 Strain fitness (log2 ratio) -2
-1
0
1 at 5650.792 kb on - strand at 5650.792 kb on - strand at 5650.792 kb on - strand at 5650.792 kb on - strand at 5650.857 kb on + strand at 5650.949 kb on - strand at 5650.949 kb on - strand at 5651.031 kb on + strand, within PS417_26150 at 5651.032 kb on - strand, within PS417_26150 at 5651.032 kb on - strand, within PS417_26150 at 5651.032 kb on - strand, within PS417_26150 at 5651.151 kb on - strand, within PS417_26150 at 5651.158 kb on - strand, within PS417_26150 at 5651.322 kb on + strand, within PS417_26150 at 5651.431 kb on - strand, within PS417_26150 at 5651.863 kb on - strand, within PS417_26155 at 5651.863 kb on - strand, within PS417_26155 at 5652.383 kb on + strand at 5652.455 kb on + strand at 5652.500 kb on + strand at 5652.501 kb on - strand at 5652.501 kb on - strand at 5652.524 kb on - strand at 5652.612 kb on + strand, within PS417_26160 at 5652.612 kb on + strand, within PS417_26160 at 5652.612 kb on + strand at 5652.613 kb on - strand at 5652.613 kb on - strand, within PS417_26160 at 5652.890 kb on + strand, within PS417_26160 at 5652.890 kb on + strand, within PS417_26160 at 5652.891 kb on - strand, within PS417_26160 at 5652.933 kb on + strand at 5652.933 kb on + strand at 5652.961 kb on - strand at 5653.055 kb on + strand at 5653.056 kb on - strand at 5653.204 kb on + strand, within PS417_26165 at 5653.205 kb on - strand, within PS417_26165 at 5653.205 kb on - strand, within PS417_26165
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.025 mg/ml remove 5,650,792 - -0.4 5,650,792 - -1.9 5,650,792 - +0.2 5,650,792 - +0.6 5,650,857 + +0.0 5,650,949 - +0.2 5,650,949 - -0.1 5,651,031 + PS417_26150 0.14 +1.1 5,651,032 - PS417_26150 0.14 -0.1 5,651,032 - PS417_26150 0.14 -0.7 5,651,032 - PS417_26150 0.14 +0.3 5,651,151 - PS417_26150 0.27 +0.7 5,651,158 - PS417_26150 0.28 -0.9 5,651,322 + PS417_26150 0.47 -0.0 5,651,431 - PS417_26150 0.59 -0.3 5,651,863 - PS417_26155 0.12 -0.8 5,651,863 - PS417_26155 0.12 -0.6 5,652,383 + +0.5 5,652,455 + -0.4 5,652,500 + +0.6 5,652,501 - +0.8 5,652,501 - +0.3 5,652,524 - -1.4 5,652,612 + PS417_26160 0.24 -0.2 5,652,612 + PS417_26160 0.24 -0.4 5,652,612 + -0.9 5,652,613 - -0.5 5,652,613 - PS417_26160 0.24 -0.4 5,652,890 + PS417_26160 0.85 +0.3 5,652,890 + PS417_26160 0.85 +1.1 5,652,891 - PS417_26160 0.85 -0.1 5,652,933 + -0.8 5,652,933 + -1.5 5,652,961 - -0.5 5,653,055 + -0.1 5,653,056 - -0.1 5,653,204 + PS417_26165 0.14 -0.1 5,653,205 - PS417_26165 0.14 +0.1 5,653,205 - PS417_26165 0.14 +0.2
Or see this region's nucleotide sequence