Strain Fitness in Pseudomonas simiae WCS417 around PS417_24270

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
5,264,351	+		PS417_24265	0.56	+0.4
5,264,352	-		PS417_24265	0.56	+1.8
5,265,071	+				-0.8
5,265,072	-				+1.6
5,265,072	-				+0.6
5,265,096	-				+0.0
5,265,096	-				-0.0
5,265,113	+				+0.3
5,265,113	+				+1.8
5,265,114	-				+0.5
5,265,114	-				-0.1
5,265,118	-				+0.3
5,265,134	-				+0.2
5,265,134	-				+0.7
5,265,137	+				+0.9
5,265,138	-				-0.2
5,265,138	-				-0.1
5,265,138	-				-0.3
5,265,138	-				-0.3
5,265,138	-				-0.8
5,265,164	+				+0.6
5,265,164	+				+0.6
5,265,165	-				-1.0
5,265,165	-				+1.9
5,265,188	+				-0.9
5,265,189	-				-0.4
5,265,195	+				+0.8
5,265,196	-				+0.3
5,265,269	-				+0.1
5,265,291	-				-0.3
5,265,305	-		PS417_24270	0.11	-1.3
5,265,373	-		PS417_24270	0.22	+1.5
5,265,469	-		PS417_24270	0.37	-0.6
5,265,469	-		PS417_24270	0.37	-0.4
5,265,486	+		PS417_24270	0.40	-1.1
5,265,486	+				-1.5
5,265,487	-		PS417_24270	0.40	-1.3
5,265,642	+		PS417_24270	0.66	-0.4
5,265,643	-		PS417_24270	0.66	-0.5
5,265,679	+		PS417_24270	0.72	-0.6
5,265,680	-		PS417_24270	0.72	+1.0
5,265,922	-				+0.1
5,265,923	+				-0.3
5,265,924	-				+0.2
5,265,924	-				+1.6
5,265,924	-				+1.0
5,266,009	+				+0.0
5,266,010	-				-0.8
5,266,010	-				+0.2
5,266,010	-				-1.2
5,266,010	-				-0.7
5,266,010	-				+0.2
5,266,010	-				-1.1
5,266,011	+				-1.8
5,266,011	+				-0.7
5,266,011	+				-0.4
5,266,070	-				+0.9
5,266,139	+				-0.3
5,266,139	+				-0.8
5,266,140	-				-0.6
5,266,140	-				-0.3
5,266,140	-				-2.5
5,266,151	+				-2.4
5,266,412	+		PS417_24275	0.12	+0.6
5,266,413	-		PS417_24275	0.12	+0.5
5,266,413	-		PS417_24275	0.12	-1.4
5,266,413	-		PS417_24275	0.12	+0.4
5,266,413	-		PS417_24275	0.12	-0.6
5,266,448	+				-0.5
5,266,448	+		PS417_24275	0.12	-2.5
5,266,448	+		PS417_24275	0.12	+0.5
5,266,449	-				-0.5
5,266,449	-		PS417_24275	0.12	-1.5
5,266,488	-		PS417_24275	0.13	-0.3
5,266,488	-		PS417_24275	0.13	+1.2
5,266,514	+		PS417_24275	0.14	-1.1
5,266,514	+		PS417_24275	0.14	-0.7