Strain Fitness in Pseudomonas simiae WCS417 around PS417_23825

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
5,154,185	-		PS417_23815	0.50	+0.4
5,154,313	+		PS417_23815	0.89	-1.2
5,154,313	+		PS417_23815	0.89	-0.9
5,154,313	+		PS417_23815	0.89	-0.4
5,154,313	+		PS417_23815	0.89	+0.3
5,154,314	-		PS417_23815	0.89	+0.4
5,154,314	-		PS417_23815	0.89	-0.2
5,154,314	-		PS417_23815	0.89	-0.1
5,154,314	-		PS417_23815	0.89	-0.6
5,154,528	+		PS417_23820	0.24	-0.3
5,154,528	+		PS417_23820	0.24	+1.4
5,154,742	+		PS417_23820	0.54	+0.2
5,154,742	+		PS417_23820	0.54	+2.1
5,154,742	+		PS417_23820	0.54	-0.2
5,154,743	-		PS417_23820	0.54	-1.3
5,154,743	-		PS417_23820	0.54	+0.1
5,154,743	-		PS417_23820	0.54	+1.0
5,154,743	-		PS417_23820	0.54	-0.7
5,154,870	+		PS417_23820	0.71	-1.9
5,155,055	+				+0.2
5,155,058	+				-0.1
5,155,059	-				-0.8
5,155,059	-				+0.1
5,155,199	+				-1.7
5,155,200	-				-0.7
5,155,691	+		PS417_23825	0.25	-0.7
5,155,692	-		PS417_23825	0.26	-0.7
5,155,844	+		PS417_23825	0.32	-1.1
5,155,865	+		PS417_23825	0.33	-1.2
5,155,976	+		PS417_23825	0.38	+0.3
5,155,977	-		PS417_23825	0.38	-2.3
5,156,181	+		PS417_23825	0.47	-1.0
5,156,356	+		PS417_23825	0.54	-1.6
5,156,356	+		PS417_23825	0.54	-0.0
5,156,480	+		PS417_23825	0.59	+0.1
5,156,481	-		PS417_23825	0.59	-1.8
5,156,481	-		PS417_23825	0.59	-1.5
5,156,484	-		PS417_23825	0.60	-0.6
5,156,587	+		PS417_23825	0.64	-1.4
5,156,686	-		PS417_23825	0.68	-1.0
5,156,686	-		PS417_23825	0.68	-0.8
5,156,730	-		PS417_23825	0.70	-1.3
5,156,847	-		PS417_23825	0.75	+0.5
5,157,072	-		PS417_23825	0.85	-1.4
5,157,236	+				-0.8
5,157,236	+				-1.5
5,157,236	+				-0.5
5,157,237	-				-0.9
5,157,237	-				+0.2
5,157,237	-				-0.7
5,157,300	-				-0.7
5,157,300	-				-1.0
5,157,434	+				-0.2
5,157,436	+				-0.1
5,157,436	+				-0.9
5,157,437	-				-0.3
5,157,584	+				+0.3
5,157,585	-				-1.8
5,157,585	-				-0.7
5,157,659	+				-0.0
5,157,660	-				+2.0
5,157,660	-				+0.3
5,157,660	-				+0.7
5,157,661	+				+0.3
5,157,662	-				-0.5
5,157,662	-				+0.4
5,157,773	+		PS417_23830	0.15	+0.0
5,158,072	+		PS417_23830	0.34	+1.0
5,158,072	+		PS417_23830	0.34	+0.0
5,158,095	+		PS417_23830	0.36	+0.1
5,158,403	+		PS417_23830	0.55	-0.2