Strain Fitness in Pseudomonas simiae WCS417 around PS417_23775
Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,139,694 | - | PS417_23770 | 0.79 | -2.3 | |
5,140,064 | + | -3.0 | |||
5,140,064 | + | -4.2 | |||
5,140,132 | + | -5.2 | |||
5,140,132 | + | -1.5 | |||
5,140,133 | - | +0.8 | |||
5,140,996 | - | PS417_23775 | 0.24 | -2.6 | |
5,142,128 | - | PS417_23775 | 0.54 | +1.0 | |
5,142,338 | - | PS417_23775 | 0.60 | -2.4 | |
5,142,489 | - | PS417_23775 | 0.64 | -2.1 | |
5,144,594 | - | PS417_23780 | 0.23 | +0.0 |
Or see this region's nucleotide sequence