Strain Fitness in Pseudomonas simiae WCS417 around PS417_22575

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,887,227	+				+0.1
4,887,228	-				-0.1
4,887,258	+				+1.2
4,887,261	+				+0.1
4,887,261	+				+0.1
4,887,283	+				+2.1
4,887,286	-				-1.8
4,887,408	-				-0.6
4,887,411	+				+0.8
4,887,427	+				+0.6
4,887,448	+				-0.4
4,887,449	-				-2.9
4,887,451	+				+0.3
4,887,451	+				+0.1
4,887,483	+				-0.3
4,887,483	+				+0.1
4,887,487	+				-1.5
4,887,488	-				-0.3
4,887,539	-		PS417_22570	0.10	-0.1
4,887,936	+				-0.6
4,887,937	-				+0.9
4,887,974	-				-1.2
4,887,974	-				+0.2
4,887,998	+				-0.7
4,888,087	-				+0.1
4,888,247	-		PS417_22575	0.20	-1.7
4,888,283	-		PS417_22575	0.22	-1.2
4,888,316	+		PS417_22575	0.25	-1.4
4,888,316	+		PS417_22575	0.25	-1.5
4,888,435	-		PS417_22575	0.33	-1.7
4,888,514	+		PS417_22575	0.39	-0.5
4,888,515	-		PS417_22575	0.39	-3.0
4,888,571	+		PS417_22575	0.43	-1.1
4,888,572	-		PS417_22575	0.43	-1.5
4,888,697	+		PS417_22575	0.51	-1.7
4,888,728	+		PS417_22575	0.54	-1.9
4,888,729	-		PS417_22575	0.54	-2.4
4,888,729	-		PS417_22575	0.54	-0.2
4,888,729	-		PS417_22575	0.54	-0.8
4,888,729	-		PS417_22575	0.54	-1.7
4,888,826	-		PS417_22575	0.60	+0.1
4,889,072	+		PS417_22575	0.78	-2.7
4,889,073	-		PS417_22575	0.78	-1.7
4,889,108	+		PS417_22575	0.80	-1.7
4,889,299	+				-1.1
4,889,299	+				-4.1
4,889,299	+				-1.7
4,889,366	+				-2.1
4,889,397	-				-1.2
4,889,778	+		PS417_22580	0.32	-1.3
4,889,778	+		PS417_22580	0.32	+1.3
4,889,779	-		PS417_22580	0.32	-0.5
4,889,779	-		PS417_22580	0.32	-1.0
4,890,042	-		PS417_22580	0.70	-1.8
4,890,042	-		PS417_22580	0.70	+0.3