Strain Fitness in Pseudomonas simiae WCS417 around PS417_22450
Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,861,122 | + | PS417_22445 | 0.37 | -2.8 | |
4,861,233 | + | PS417_22445 | 0.47 | -2.6 | |
4,861,243 | + | PS417_22445 | 0.48 | -2.3 | |
4,861,452 | + | PS417_22445 | 0.68 | -2.3 | |
4,861,694 | + | -1.3 | |||
4,862,220 | - | PS417_22450 | 0.70 | -1.3 | |
4,862,220 | - | PS417_22450 | 0.70 | -1.5 | |
4,862,324 | + | PS417_22450 | 0.87 | -2.4 | |
4,862,466 | + | -1.9 | |||
4,862,978 | + | +1.5 | |||
4,862,984 | + | -3.2 | |||
4,862,985 | - | -1.8 | |||
4,863,019 | + | -1.8 | |||
4,863,019 | + | -1.7 | |||
4,863,020 | - | +0.0 | |||
4,863,020 | - | -1.3 | |||
4,863,020 | - | -0.1 | |||
4,863,020 | - | -0.1 | |||
4,863,136 | + | -0.9 | |||
4,863,136 | + | -0.7 | |||
4,863,136 | + | +0.2 | |||
4,863,137 | - | -0.2 |
Or see this region's nucleotide sequence