Strain Fitness in Pseudomonas simiae WCS417 around PS417_22135

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,794,967	+				+2.9
4,794,968	-		PS417_22130	0.42	+0.2
4,795,066	+		PS417_22130	0.51	+0.2
4,795,066	+		PS417_22130	0.51	-0.5
4,795,066	+		PS417_22130	0.51	+0.8
4,795,066	+		PS417_22130	0.51	-1.1
4,795,168	+		PS417_22130	0.60	-0.4
4,795,169	-		PS417_22130	0.60	+0.6
4,795,601	-				-0.3
4,795,611	+				+0.0
4,795,612	-				-0.4
4,795,631	+				-0.5
4,795,632	-				+0.1
4,795,641	+				+0.8
4,795,681	-				-0.3
4,795,698	+				+0.5
4,795,750	+		PS417_22135	0.13	-0.2
4,795,752	+		PS417_22135	0.13	-1.0
4,795,753	-		PS417_22135	0.13	-0.5
4,795,753	-		PS417_22135	0.13	-0.8
4,795,993	-		PS417_22135	0.42	-0.5
4,795,995	+		PS417_22135	0.42	+0.1
4,795,995	+		PS417_22135	0.42	-0.1
4,795,995	+		PS417_22135	0.42	+0.9
4,796,000	-		PS417_22135	0.43	-0.6
4,796,015	-		PS417_22135	0.44	-0.1
4,796,196	+		PS417_22135	0.66	+1.1
4,796,197	-		PS417_22135	0.66	-0.1
4,796,268	+		PS417_22135	0.74	+0.6
4,796,268	+		PS417_22135	0.74	-0.1
4,796,268	+				+1.4
4,796,268	+		PS417_22135	0.74	+1.9
4,796,269	-		PS417_22135	0.74	+0.5
4,796,404	-				-0.0
4,796,433	+				-0.7
4,796,479	+				+0.3
4,796,606	-		PS417_22140	0.14	-0.1
4,796,756	-		PS417_22140	0.31	-0.7
4,796,888	-		PS417_22140	0.45	+0.2
4,796,888	-		PS417_22140	0.45	-0.3
4,797,037	+				+0.1
4,797,037	+		PS417_22140	0.61	-0.2
4,797,038	-		PS417_22140	0.62	-0.1
4,797,038	-		PS417_22140	0.62	+1.1
4,797,038	-		PS417_22140	0.62	-0.4
4,797,217	+		PS417_22140	0.81	-0.2
4,797,218	-		PS417_22140	0.81	-0.4
4,797,271	+		PS417_22140	0.87	-0.8
4,797,272	-		PS417_22140	0.87	-0.1
4,797,272	-		PS417_22140	0.87	+0.3
4,797,277	+		PS417_22140	0.88	-0.1
4,797,277	+		PS417_22140	0.88	-1.4
4,797,277	+		PS417_22140	0.88	-0.1
4,797,278	-		PS417_22140	0.88	-0.1
4,797,278	-		PS417_22140	0.88	+0.1
4,797,278	-		PS417_22140	0.88	+0.5
4,797,278	-		PS417_22140	0.88	+0.4
4,797,278	-		PS417_22140	0.88	-0.2
4,797,399	+				+0.2
4,797,444	-				+0.7
4,797,485	-				+0.3
4,797,485	-				-0.8