Strain Fitness in Pseudomonas simiae WCS417 around PS417_22060
Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,779,172 | + | +0.1 | |||
4,779,173 | - | -0.4 | |||
4,779,261 | - | +1.0 | |||
4,779,333 | + | -0.4 | |||
4,779,334 | - | +0.0 | |||
4,779,334 | - | +0.9 | |||
4,779,365 | + | +0.2 | |||
4,779,631 | + | +2.1 | |||
4,779,631 | + | +0.4 | |||
4,779,667 | - | +0.1 | |||
4,779,827 | + | +0.4 | |||
4,779,981 | + | PS417_22060 | 0.40 | -0.5 | |
4,780,089 | - | PS417_22060 | 0.69 | -0.8 | |
4,780,316 | - | -0.3 | |||
4,780,321 | + | +1.1 | |||
4,780,669 | + | PS417_22065 | 0.21 | -2.5 | |
4,780,759 | + | PS417_22065 | 0.26 | +0.6 |
Or see this region's nucleotide sequence