Strain Fitness in Pseudomonas simiae WCS417 around PS417_21990

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,767,608	+				+0.5
4,767,608	+				+0.8
4,767,608	+				+0.0
4,767,608	+				+0.0
4,767,609	-				-0.4
4,767,612	+				+0.4
4,767,664	+				+0.5
4,767,665	-				-0.1
4,767,665	-				+0.8
4,767,667	+				-0.1
4,767,667	+				-0.0
4,767,723	+				+0.3
4,767,730	+				+0.2
4,768,276	+				+0.3
4,768,297	+				-0.3
4,768,297	+				-0.3
4,768,297	+				+0.4
4,768,643	+		PS417_21990	0.17	+0.8
4,768,841	+		PS417_21990	0.36	+0.1
4,768,841	+		PS417_21990	0.36	+0.1
4,769,129	+		PS417_21990	0.64	+1.7
4,769,494	+				+0.4
4,769,498	+				+0.2
4,769,498	+				-0.1
4,769,498	+				+0.3
4,769,498	+				-1.1
4,769,498	+				+0.0
4,769,499	-				+0.3
4,769,499	-				-0.4
4,769,499	-				-0.7
4,769,499	-				+0.4
4,769,558	+				-0.4
4,769,559	-				+0.6
4,769,745	-				-0.6
4,769,756	+				-0.0
4,769,756	+				+0.3
4,769,757	-				+0.8
4,769,757	-				-0.3
4,769,806	+				-0.6
4,769,806	+				+0.7
4,769,836	+				+0.2
4,769,994	+		PS417_21995	0.77	-0.0
4,769,995	-		PS417_21995	0.78	+0.3
4,769,995	-		PS417_21995	0.78	+0.9
4,769,995	-		PS417_21995	0.78	-0.6
4,770,000	+		PS417_21995	0.80	-0.4
4,770,001	-		PS417_21995	0.80	-0.8
4,770,010	-		PS417_21995	0.84	+0.0
4,770,053	-				+1.6
4,770,107	+				-0.2
4,770,113	+				-1.7
4,770,114	-				+0.6
4,770,182	+				+0.6
4,770,182	+				-0.1
4,770,245	+				+1.0
4,770,245	+				-1.7