Strain Fitness in Pseudomonas simiae WCS417 around PS417_21870

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,746,134	+				-0.1
4,746,134	+				-0.1
4,746,135	-				-1.1
4,746,135	-				-0.2
4,746,138	-				-0.3
4,746,138	-				-0.1
4,746,148	-		PS417_21860	0.13	-0.3
4,746,480	+				-0.9
4,746,480	+		PS417_21865	0.16	-0.4
4,746,481	-		PS417_21865	0.17	+0.3
4,746,481	-		PS417_21865	0.17	-0.1
4,746,482	+		PS417_21865	0.17	+0.0
4,746,482	+		PS417_21865	0.17	-0.1
4,746,668	+		PS417_21865	0.74	-0.9
4,746,669	-		PS417_21865	0.75	-0.2
4,746,753	+				+1.1
4,746,959	+				-0.4
4,746,960	-				+0.1
4,746,982	+				-1.5
4,746,983	-				-0.1
4,747,194	-		PS417_21870	0.19	-0.8
4,747,231	-		PS417_21870	0.22	-2.3
4,747,231	-		PS417_21870	0.22	-0.4
4,747,962	-		PS417_21870	0.87	+0.1
4,748,100	-				+0.5
4,748,101	+				+1.4
4,748,101	+				+0.1
4,748,101	+				+0.6
4,748,101	+				-0.2
4,748,102	-				-0.8
4,748,102	-				-0.5
4,748,102	-				+1.1
4,748,105	+				-0.3
4,748,105	+				-0.1
4,748,106	-				-0.2
4,748,285	-		PS417_21875	0.27	-0.2
4,748,342	+		PS417_21875	0.35	-0.2
4,748,366	-		PS417_21875	0.39	-1.3
4,748,763	-				+0.3
4,748,763	-				+0.1
4,748,763	-				+0.2
4,748,901	+		PS417_21880	0.17	-0.4
4,748,973	+		PS417_21880	0.25	+0.5