Strain Fitness in Pseudomonas simiae WCS417 around PS417_20645

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,485,972	+				-0.8
4,486,001	-				+1.1
4,486,050	-				+0.9
4,486,085	-				+1.4
4,486,085	-				+0.5
4,486,085	-				-0.5
4,486,085	-				+0.5
4,486,085	-				+1.0
4,486,085	-				+0.5
4,486,085	-				+0.6
4,486,089	-				-0.1
4,486,089	-				+0.6
4,486,121	-				+0.0
4,486,166	+				-1.5
4,486,168	+				-0.4
4,486,169	-				+2.6
4,486,169	-				-0.1
4,486,169	-				+0.6
4,486,377	-				+0.8
4,486,441	-				+0.5
4,486,561	-		PS417_20645	0.17	+1.2
4,486,596	+		PS417_20645	0.20	+0.1
4,486,597	-		PS417_20645	0.20	+1.0
4,486,601	+		PS417_20645	0.20	-0.9
4,486,651	-		PS417_20645	0.23	+1.2
4,486,697	+		PS417_20645	0.27	-0.1
4,486,698	-		PS417_20645	0.27	+0.7
4,486,749	+		PS417_20645	0.30	+1.0
4,486,749	+		PS417_20645	0.30	-0.1
4,486,750	-		PS417_20645	0.30	+0.2
4,486,750	-		PS417_20645	0.30	+0.9
4,486,945	+		PS417_20645	0.44	+0.1
4,486,946	-		PS417_20645	0.44	+0.8
4,486,973	+		PS417_20645	0.46	-0.4
4,486,973	+		PS417_20645	0.46	-1.4
4,486,973	+		PS417_20645	0.46	-1.1
4,486,974	-		PS417_20645	0.46	+0.8
4,486,974	-		PS417_20645	0.46	+3.6
4,486,974	-		PS417_20645	0.46	+0.7
4,486,974	-		PS417_20645	0.46	+0.9
4,487,135	-		PS417_20645	0.57	+0.7
4,487,144	+		PS417_20645	0.57	-0.7
4,487,144	+		PS417_20645	0.57	-0.8
4,487,198	+		PS417_20645	0.61	-0.3
4,487,198	+		PS417_20645	0.61	+0.4
4,487,199	-		PS417_20645	0.61	+0.9
4,487,249	+		PS417_20645	0.65	-1.4
4,487,249	+		PS417_20645	0.65	-2.4
4,487,384	-		PS417_20645	0.74	-0.4
4,487,384	-		PS417_20645	0.74	+1.2
4,487,389	+		PS417_20645	0.74	-0.5
4,487,392	+		PS417_20645	0.75	+0.1
4,487,392	+		PS417_20645	0.75	-0.3
4,487,392	+		PS417_20645	0.75	-0.9
4,487,392	+		PS417_20645	0.75	+1.0
4,487,392	+		PS417_20645	0.75	+0.5
4,487,393	-		PS417_20645	0.75	-0.6
4,487,577	+		PS417_20645	0.87	-0.2
4,487,751	-				+1.0
4,487,751	-				+1.0
4,487,751	-				+0.4
4,487,753	-				+0.3
4,487,753	-				+0.3
4,487,889	+				+1.9
4,488,221	+				+1.0
4,488,221	+		PS417_20650	0.34	+2.6
4,488,233	-		PS417_20650	0.35	+1.8
4,488,266	+		PS417_20650	0.38	+1.7
4,488,325	+		PS417_20650	0.42	+3.5
4,488,325	+		PS417_20650	0.42	+0.3
4,488,366	+				+1.0
4,488,378	-		PS417_20650	0.46	+1.4
4,488,378	-		PS417_20650	0.46	+1.9
4,488,393	-		PS417_20650	0.48	+1.7
4,488,520	+		PS417_20650	0.58	+1.3
4,488,521	-				-0.6
4,488,558	-		PS417_20650	0.61	+1.1
4,488,561	+				+1.6
4,488,562	-		PS417_20650	0.61	+2.9
4,488,596	+		PS417_20650	0.64	+0.7
4,488,598	+		PS417_20650	0.64	+2.3
4,488,599	-		PS417_20650	0.64	+1.3
4,488,599	-		PS417_20650	0.64	+1.7
4,488,635	+		PS417_20650	0.67	-0.3
4,488,702	-		PS417_20650	0.72	+2.1
4,488,735	+		PS417_20650	0.74	+1.5
4,488,754	+		PS417_20650	0.76	+1.8
4,488,754	+		PS417_20650	0.76	+2.0
4,488,755	-		PS417_20650	0.76	+1.5
4,488,755	-		PS417_20650	0.76	+2.2
4,488,755	-		PS417_20650	0.76	+1.5