Strain Fitness in Pseudomonas simiae WCS417 around PS417_20140

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,369,988	+		PS417_20130	0.62	+0.0
4,369,988	+		PS417_20130	0.62	-1.8
4,369,988	+		PS417_20130	0.62	-0.3
4,369,989	-		PS417_20130	0.62	-0.2
4,369,989	-		PS417_20130	0.62	-0.0
4,369,989	-		PS417_20130	0.62	+1.0
4,369,989	-		PS417_20130	0.62	-0.4
4,369,989	-		PS417_20130	0.62	-0.5
4,369,989	-		PS417_20130	0.62	+0.5
4,370,021	+		PS417_20130	0.67	+0.2
4,370,088	+		PS417_20130	0.76	-0.3
4,370,089	-		PS417_20130	0.76	-0.4
4,370,089	-		PS417_20130	0.76	-0.1
4,370,195	-				+3.3
4,370,201	+				-0.6
4,370,202	-				+0.5
4,370,202	-				+3.3
4,370,202	-				-0.4
4,370,202	-				+0.2
4,370,237	-				-0.0
4,370,252	-				+0.7
4,370,252	-				-0.9
4,370,252	-				-0.8
4,370,258	+				-2.1
4,370,259	-				-0.6
4,370,259	-				-0.0
4,370,334	-				-0.2
4,370,334	-				-0.3
4,370,334	-				+0.2
4,370,463	+				-0.2
4,370,562	-				-0.4
4,370,580	-				-0.1
4,370,642	+				+0.7
4,370,642	+				+0.1
4,370,670	+		PS417_20135	0.19	-0.2
4,370,670	+				+0.4
4,370,670	+		PS417_20135	0.19	-1.6
4,370,670	+		PS417_20135	0.19	+0.2
4,370,671	-		PS417_20135	0.19	+1.3
4,370,671	-		PS417_20135	0.19	+2.0
4,370,671	-		PS417_20135	0.19	+0.6
4,370,671	-				-0.6
4,370,671	-		PS417_20135	0.19	-0.2
4,370,714	+		PS417_20135	0.42	+0.1
4,370,715	-		PS417_20135	0.42	+0.2
4,370,715	-		PS417_20135	0.42	-1.0
4,370,766	+		PS417_20135	0.69	+0.6
4,370,770	+		PS417_20135	0.71	+0.2
4,370,938	+				+0.2
4,370,938	+				-1.5
4,370,938	+				+0.6
4,370,938	+				-1.5
4,370,938	+				-0.6
4,370,939	-				-0.0
4,370,966	+				-0.2
4,371,218	+		PS417_20140	0.46	-0.8
4,371,219	-		PS417_20140	0.47	-0.8
4,371,518	-				-1.0
4,371,525	+				+1.8
4,371,525	+				+0.2
4,371,617	+				+1.2
4,371,890	+		PS417_20145	0.42	+0.3
4,371,891	-		PS417_20145	0.43	-0.4
4,372,053	+		PS417_20145	0.62	+0.1
4,372,053	+		PS417_20145	0.62	+0.4
4,372,105	+		PS417_20145	0.68	-1.8
4,372,105	+		PS417_20145	0.68	-0.0
4,372,105	+		PS417_20145	0.68	+1.2
4,372,106	-		PS417_20145	0.68	+0.2
4,372,165	-		PS417_20145	0.75	+1.0
4,372,165	-				+2.0
4,372,167	+		PS417_20145	0.76	+0.4
4,372,167	+		PS417_20145	0.76	+1.4
4,372,168	-		PS417_20145	0.76	+1.0
4,372,284	+		PS417_20145	0.90	-1.0
4,372,284	+				+1.0
4,372,365	+				-0.4
4,372,365	+				+0.1
4,372,365	+				+0.4
4,372,365	+				-0.1
4,372,365	+				-0.3
4,372,366	-				-0.2
4,372,366	-				-0.0
4,372,375	+				-1.6
4,372,375	+				+0.6
4,372,389	+				+0.7
4,372,389	+				-0.0
4,372,389	+				-0.6