Strain Fitness in Pseudomonas simiae WCS417 around PS417_20125

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,368,933	-				-2.3
4,369,148	-		PS417_20125	0.40	+0.1
4,369,215	-		PS417_20125	0.51	+1.1
4,369,239	+		PS417_20125	0.54	+0.8
4,369,406	+		PS417_20125	0.80	+0.6
4,369,487	-				+0.8
4,369,502	-				-0.0
4,369,502	-				+0.1
4,369,533	+				-0.1
4,369,534	-				-0.2
4,369,543	+				-0.6
4,369,544	-				-0.1
4,369,608	+				+0.0
4,369,609	-				+2.6
4,369,609	-				-0.2
4,369,628	+		PS417_20130	0.12	-1.5
4,369,628	+		PS417_20130	0.12	-0.0
4,369,628	+		PS417_20130	0.12	-0.3
4,369,628	+				+0.4
4,369,629	-		PS417_20130	0.12	-0.1
4,369,629	-		PS417_20130	0.12	+0.0
4,369,629	-		PS417_20130	0.12	-1.8
4,369,629	-		PS417_20130	0.12	+0.1
4,369,629	-		PS417_20130	0.12	+0.3
4,369,629	-		PS417_20130	0.12	+0.1
4,369,796	+		PS417_20130	0.35	-0.3
4,369,796	+				+1.4
4,369,937	+		PS417_20130	0.55	+0.8
4,369,988	+		PS417_20130	0.62	+0.0
4,369,988	+		PS417_20130	0.62	-1.8
4,369,988	+		PS417_20130	0.62	-0.3
4,369,989	-		PS417_20130	0.62	-0.2
4,369,989	-		PS417_20130	0.62	-0.0
4,369,989	-		PS417_20130	0.62	+1.0
4,369,989	-		PS417_20130	0.62	-0.4
4,369,989	-		PS417_20130	0.62	-0.5
4,369,989	-		PS417_20130	0.62	+0.5
4,370,021	+		PS417_20130	0.67	+0.2
4,370,088	+		PS417_20130	0.76	-0.3
4,370,089	-		PS417_20130	0.76	-0.4
4,370,089	-		PS417_20130	0.76	-0.1
4,370,195	-				+3.3
4,370,201	+				-0.6
4,370,202	-				+0.5
4,370,202	-				+3.3
4,370,202	-				-0.4
4,370,202	-				+0.2
4,370,237	-				-0.0
4,370,252	-				+0.7
4,370,252	-				-0.9
4,370,252	-				-0.8
4,370,258	+				-2.1
4,370,259	-				-0.6
4,370,259	-				-0.0
4,370,334	-				-0.2
4,370,334	-				-0.3
4,370,334	-				+0.2
4,370,463	+				-0.2