Strain Fitness in Pseudomonas simiae WCS417 around PS417_19865

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,312,365	+		PS417_19860	0.40	+1.8
4,312,405	-		PS417_19860	0.42	+1.0
4,312,533	+		PS417_19860	0.50	-1.0
4,312,533	+		PS417_19860	0.50	+2.3
4,312,539	+		PS417_19860	0.51	+1.6
4,312,589	+		PS417_19860	0.54	+2.2
4,312,590	-		PS417_19860	0.54	+1.6
4,312,649	+		PS417_19860	0.58	+1.8
4,312,649	+		PS417_19860	0.58	+1.2
4,312,649	+		PS417_19860	0.58	+0.6
4,312,649	+		PS417_19860	0.58	+1.8
4,312,650	-		PS417_19860	0.58	+1.7
4,312,650	-		PS417_19860	0.58	+2.4
4,312,692	+		PS417_19860	0.60	-2.4
4,312,692	+		PS417_19860	0.60	+1.1
4,312,692	+		PS417_19860	0.60	+2.1
4,312,693	-		PS417_19860	0.60	+1.2
4,312,693	-		PS417_19860	0.60	+1.0
4,312,750	-		PS417_19860	0.64	+1.1
4,312,865	+		PS417_19860	0.71	+2.4
4,312,869	+		PS417_19860	0.71	+2.2
4,312,869	+		PS417_19860	0.71	+1.9
4,312,869	+		PS417_19860	0.71	+2.2
4,312,869	+		PS417_19860	0.71	+0.6
4,312,869	+		PS417_19860	0.71	-0.4
4,312,869	+		PS417_19860	0.71	+2.4
4,312,870	-		PS417_19860	0.71	+1.7
4,312,871	+		PS417_19860	0.71	+2.0
4,312,872	-		PS417_19860	0.72	+0.6
4,312,872	-		PS417_19860	0.72	+0.8
4,312,872	-		PS417_19860	0.72	+2.0
4,312,872	-		PS417_19860	0.72	+2.0
4,312,872	-		PS417_19860	0.72	+0.9
4,312,872	-		PS417_19860	0.72	+1.7
4,312,872	-		PS417_19860	0.72	+2.6
4,312,895	+		PS417_19860	0.73	+1.9
4,312,931	+		PS417_19860	0.75	+2.2
4,312,931	+		PS417_19860	0.75	+3.1
4,312,932	-		PS417_19860	0.75	+1.8
4,312,932	-		PS417_19860	0.75	+2.1
4,312,932	-		PS417_19860	0.75	+1.8
4,313,127	+		PS417_19860	0.87	+1.5
4,313,270	+				+1.7
4,313,270	+				+2.0
4,313,352	-				+2.3
4,313,363	+				+2.1
4,313,364	-				+1.6
4,313,410	+				+2.2
4,313,411	-				+2.0
4,313,411	-				+2.0
4,313,411	-				+2.2
4,313,411	-				+1.8
4,313,413	+				+2.3
4,313,413	+				+2.2
4,313,414	-				+1.3
4,313,414	-				+0.9
4,313,855	+		PS417_19865	0.25	+1.8
4,313,856	-		PS417_19865	0.25	+1.9
4,313,878	+		PS417_19865	0.26	+2.1
4,313,878	+		PS417_19865	0.26	+2.0
4,313,889	-		PS417_19865	0.27	+2.7
4,314,077	+		PS417_19865	0.36	+1.8
4,314,078	-				+2.6
4,314,126	-		PS417_19865	0.38	+1.0
4,314,266	-		PS417_19865	0.45	+1.4
4,314,295	+		PS417_19865	0.47	+1.8
4,314,381	-		PS417_19865	0.51	+0.1
4,314,381	-		PS417_19865	0.51	+2.2
4,314,564	-				+0.6
4,314,579	+		PS417_19865	0.60	+1.8
4,314,579	+		PS417_19865	0.60	+2.0
4,314,631	+		PS417_19865	0.63	+2.2
4,314,727	-		PS417_19865	0.68	+0.5
4,314,727	-		PS417_19865	0.68	+2.2
4,314,777	+		PS417_19865	0.70	+2.4
4,314,778	-		PS417_19865	0.70	+3.0
4,314,789	-		PS417_19865	0.71	+1.5
4,314,789	-		PS417_19865	0.71	+2.5
4,315,129	+		PS417_19865	0.87	+2.7
4,315,129	+		PS417_19865	0.87	+1.2
4,315,130	-		PS417_19865	0.87	+1.4
4,315,192	+				+2.0
4,315,357	-				+2.6
4,315,401	-				-0.1
4,315,401	-				-0.0
4,315,402	+				+1.8
4,315,402	+				+1.9
4,315,402	+				+3.5
4,315,402	+				+3.7
4,315,402	+				+2.1
4,315,402	+				+1.9
4,315,403	-				-0.4
4,315,403	-				-0.1
4,315,403	-				-1.0
4,315,431	-				-0.0
4,315,625	+		PS417_19870	0.18	+1.5
4,315,626	-		PS417_19870	0.18	+0.4
4,316,230	+		PS417_19870	0.65	-0.2