Strain Fitness in Pseudomonas simiae WCS417 around PS417_19825

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,303,588	+		PS417_19820	0.40	-0.2
4,303,692	+		PS417_19820	0.49	-0.5
4,303,692	+		PS417_19820	0.49	+0.7
4,303,693	-		PS417_19820	0.49	+1.2
4,303,693	-		PS417_19820	0.49	+0.1
4,303,693	-		PS417_19820	0.49	-0.1
4,304,144	-		PS417_19820	0.86	+0.4
4,304,176	-		PS417_19820	0.89	+0.3
4,304,252	+				+0.8
4,304,465	+				+2.5
4,304,465	+				+2.5
4,304,466	-				+3.3
4,304,588	+		PS417_19825	0.11	+3.0
4,304,589	-		PS417_19825	0.11	+2.3
4,304,987	+				+1.7
4,304,987	+		PS417_19825	0.38	+2.7
4,304,987	+		PS417_19825	0.38	+3.8
4,304,987	+		PS417_19825	0.38	+2.8
4,305,102	+		PS417_19825	0.46	+2.8
4,305,103	-		PS417_19825	0.46	+2.8
4,305,332	+		PS417_19825	0.62	+3.0
4,305,516	-		PS417_19825	0.74	+2.9
4,305,516	-		PS417_19825	0.74	+3.0
4,305,516	-		PS417_19825	0.74	+2.7
4,305,516	-		PS417_19825	0.74	+1.6
4,305,516	-		PS417_19825	0.74	+3.2
4,305,567	-		PS417_19825	0.78	+3.5
4,305,567	-		PS417_19825	0.78	+1.9
4,305,646	+		PS417_19825	0.83	+2.2
4,305,647	-		PS417_19825	0.83	+2.5
4,305,689	-		PS417_19825	0.86	+3.0
4,305,719	-		PS417_19825	0.88	+3.0
4,305,839	-				+2.7
4,305,958	+				+3.8
4,305,969	-				-1.6
4,305,973	+				+2.8
4,305,973	+				+2.4
4,305,973	+				+2.7
4,305,973	+				+3.0
4,305,973	+				+2.9
4,305,974	-				-0.0
4,305,974	-				-0.8
4,305,976	+				+2.7
4,305,976	+				+3.1
4,305,976	+				+4.0
4,305,977	-				-0.0
4,305,977	-				-0.9
4,305,977	-				-1.0
4,306,003	+				+3.0
4,306,003	+				+3.1
4,306,003	+				+3.8
4,306,004	-				-0.4
4,306,004	-				-0.6
4,306,004	-				+0.2
4,306,007	+				+3.3
4,306,007	+				+3.6
4,306,007	+				+3.7
4,306,007	+				+2.8
4,306,007	+				+3.2
4,306,008	-				-1.7
4,306,035	-				-3.3
4,306,085	-				-1.4
4,306,103	+		PS417_19830	0.12	+3.2
4,306,177	+		PS417_19830	0.37	+2.0
4,306,177	+		PS417_19830	0.37	+2.9
4,306,178	-		PS417_19830	0.37	-1.6
4,306,186	-		PS417_19830	0.40	-0.0
4,306,342	-				-1.5
4,306,369	+				+2.0
4,306,369	+				+0.5
4,306,369	+				+1.8
4,306,369	+				+2.1
4,306,369	+				+1.1
4,306,369	+				+3.0
4,306,370	-				-0.2
4,306,370	-				+2.0
4,306,391	+				+2.0
4,306,391	+				+1.5
4,306,392	-				+0.4
4,306,411	+				+1.3
4,306,412	-				+1.7
4,306,520	+		PS417_19835	0.32	+1.5
4,306,521	-		PS417_19835	0.32	+1.0
4,306,801	-				-0.4
4,306,814	+				-1.0