Strain Fitness in Pseudomonas simiae WCS417 around PS417_19625

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,267,311	+				+0.5
4,267,312	-				+0.0
4,267,360	+				+0.2
4,267,377	+				+0.2
4,267,377	+				+0.4
4,267,378	-				-1.5
4,267,416	+				-0.9
4,267,416	+				-0.1
4,267,416	+				+0.2
4,267,416	+				+0.1
4,267,417	-				-1.1
4,267,417	-				+0.5
4,267,433	+				+0.3
4,267,433	+				+0.4
4,267,653	+		PS417_19620	0.49	+0.4
4,267,654	-		PS417_19620	0.49	-0.4
4,267,812	-		PS417_19620	0.84	-1.2
4,267,848	+				+0.3
4,267,889	+				+0.8
4,267,890	-				-0.8
4,267,890	-				-0.6
4,267,914	+				+0.2
4,267,914	+				+0.8
4,267,915	-				-0.7
4,268,018	-				-0.3
4,268,072	+				+0.4
4,268,072	+				+0.9
4,268,075	+				+0.7
4,268,115	-				-0.3
4,268,123	+				+0.3
4,268,124	-				-0.5
4,268,127	-				-1.7
4,268,162	+				+0.3
4,268,178	-				-1.3
4,268,253	-				+0.4
4,268,256	+				-0.6
4,268,256	+				+2.9
4,268,256	+				-1.4
4,268,257	-				+1.3
4,268,257	-				-2.1
4,268,257	-				-1.7
4,268,257	-				-0.7
4,268,257	-				-0.8
4,268,257	-				+0.7
4,268,257	-				-0.8
4,268,611	+		PS417_19625	0.40	-1.4
4,268,611	+		PS417_19625	0.40	-2.1
4,268,934	-		PS417_19625	0.76	-1.0
4,268,996	+		PS417_19625	0.83	-1.1
4,268,997	-		PS417_19625	0.84	-2.2
4,269,153	+				-0.6
4,269,154	-				-0.6
4,269,222	-				+0.9
4,269,222	-		PS417_19630	0.12	-1.2
4,269,258	+		PS417_19630	0.18	-0.7
4,269,592	+		PS417_19630	0.68	-1.1
4,269,639	+		PS417_19630	0.76	-0.8
4,269,640	-		PS417_19630	0.76	-0.7
4,269,759	+				-3.1
4,269,760	-				-2.0
4,269,760	-				-0.9
4,269,894	+		PS417_19635	0.15	-0.4
4,269,895	-		PS417_19635	0.15	-0.1
4,269,895	-		PS417_19635	0.15	-1.1
4,269,895	-		PS417_19635	0.15	+0.2
4,270,064	+		PS417_19635	0.33	-1.1
4,270,064	+		PS417_19635	0.33	-0.7
4,270,065	-		PS417_19635	0.33	-1.1
4,270,065	-		PS417_19635	0.33	-0.3
4,270,065	-		PS417_19635	0.33	-1.7
4,270,065	-		PS417_19635	0.33	-0.6
4,270,065	-		PS417_19635	0.33	-0.5
4,270,065	-		PS417_19635	0.33	+0.3