Strain Fitness in Pseudomonas simiae WCS417 around PS417_18850

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
4,084,385	-				+1.3
4,084,616	+				-0.6
4,084,646	+				-0.1
4,084,723	-				+1.2
4,084,793	+		PS417_18845	0.15	-0.2
4,084,794	-		PS417_18845	0.15	-0.7
4,084,977	+				+3.0
4,084,978	-		PS417_18845	0.50	-0.4
4,085,069	-		PS417_18845	0.67	+0.4
4,085,237	+				-0.0
4,085,237	+				+0.7
4,085,238	-				-1.0
4,085,238	-				+0.2
4,085,238	-				+0.0
4,085,238	-				+0.1
4,085,238	-				+0.3
4,085,358	+				-0.0
4,085,358	+				+1.3
4,085,359	-				-2.5
4,085,359	-				+0.9
4,085,359	-				+0.2
4,085,359	-				+0.8
4,085,359	-				+0.3
4,085,359	-				+0.2
4,085,359	-				-0.2
4,085,359	-				+0.2
4,085,416	+		PS417_18850	0.22	-0.3
4,085,424	+		PS417_18850	0.23	-0.1
4,085,425	-				+1.0
4,085,549	-		PS417_18850	0.50	-1.4
4,085,576	+		PS417_18850	0.56	-1.1
4,085,820	+				+0.5
4,086,053	+		PS417_18855	0.42	+0.9
4,086,089	+		PS417_18855	0.49	-0.2
4,086,089	+		PS417_18855	0.49	+0.2
4,086,089	+		PS417_18855	0.49	-0.9
4,086,090	-		PS417_18855	0.49	+0.0
4,086,219	+		PS417_18855	0.73	+0.4
4,086,220	-				-0.3
4,086,220	-		PS417_18855	0.73	+0.2
4,086,299	+		PS417_18855	0.87	-1.0
4,086,299	+		PS417_18855	0.87	-0.1
4,086,299	+		PS417_18855	0.87	-1.3
4,086,299	+		PS417_18855	0.87	+0.5
4,086,300	-		PS417_18855	0.88	+0.3
4,086,346	-				+0.2
4,086,346	-				+0.1
4,086,346	-				+0.1
4,086,350	-				-0.8
4,086,452	-				-2.8
4,086,456	-				-0.9
4,086,486	-				+0.2
4,086,493	-				+0.1
4,086,493	-				+0.2
4,086,638	-		PS417_18860	0.28	-0.2
4,086,638	-		PS417_18860	0.28	-1.8
4,086,658	-		PS417_18860	0.33	+0.2
4,086,658	-		PS417_18860	0.33	+0.1
4,086,658	-				-0.0
4,086,658	-		PS417_18860	0.33	-0.3
4,086,658	-		PS417_18860	0.33	-0.8
4,086,680	+		PS417_18860	0.39	+0.0