Strain Fitness in Pseudomonas simiae WCS417 around PS417_18545
Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,025,976 | - | +0.3 | |||
4,026,101 | - | PS417_18540 | 0.23 | -0.5 | |
4,026,259 | + | PS417_18540 | 0.51 | +0.4 | |
4,026,260 | - | PS417_18540 | 0.51 | -0.7 | |
4,026,279 | - | PS417_18540 | 0.55 | -2.5 | |
4,026,363 | - | PS417_18540 | 0.70 | -1.5 | |
4,026,523 | - | -1.6 | |||
4,026,684 | + | -0.1 | |||
4,026,931 | + | PS417_18545 | 0.21 | -0.2 | |
4,026,938 | + | PS417_18545 | 0.22 | -1.2 | |
4,027,430 | - | -1.4 |
Or see this region's nucleotide sequence