Strain Fitness in Pseudomonas simiae WCS417 around PS417_18290

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
3,986,220	-				+0.5
3,986,473	-		PS417_18285	0.78	-0.8
3,986,583	-		PS417_18285	0.81	+0.7
3,986,583	-		PS417_18285	0.81	+0.5
3,986,700	-		PS417_18285	0.85	-0.3
3,986,804	-		PS417_18285	0.88	+0.6
3,986,887	-				-1.0
3,986,937	+				-0.0
3,986,938	-				-0.8
3,986,938	-				-1.1
3,986,939	+				-0.3
3,986,939	+				+1.5
3,986,939	+				-0.2
3,986,939	+				-0.9
3,986,939	+				+0.3
3,986,940	-				+0.8
3,986,940	-				-0.1
3,986,940	-				-1.7
3,987,024	-				+0.2
3,987,057	+				+0.7
3,987,472	+		PS417_18290	0.25	-0.1
3,987,472	+		PS417_18290	0.25	+0.3
3,987,472	+		PS417_18290	0.25	+0.2
3,987,472	+		PS417_18290	0.25	+0.2
3,987,472	+		PS417_18290	0.25	-0.1
3,987,473	-		PS417_18290	0.25	+0.6
3,987,473	-		PS417_18290	0.25	-0.4
3,987,473	-		PS417_18290	0.25	+0.2
3,987,473	-		PS417_18290	0.25	-0.2
3,987,586	+		PS417_18290	0.35	-0.8
3,987,587	-		PS417_18290	0.35	-0.8
3,987,587	-		PS417_18290	0.35	-0.5
3,987,587	-		PS417_18290	0.35	-0.4
3,987,712	+				+3.0
3,987,822	-		PS417_18290	0.55	-0.2
3,987,822	-		PS417_18290	0.55	+0.4
3,988,069	+		PS417_18290	0.76	+0.2
3,988,069	+		PS417_18290	0.76	+1.0
3,988,069	+		PS417_18290	0.76	+0.4
3,988,216	-		PS417_18290	0.88	-0.2
3,988,216	-		PS417_18290	0.88	-0.4
3,988,331	-				+0.4
3,988,331	-				+0.0
3,988,356	-				+0.7
3,988,465	+				-0.2
3,988,466	-				+0.6
3,988,480	-				+0.2
3,988,511	+				-1.1
3,988,512	-				+0.7
3,988,836	+		PS417_18295	0.24	-0.2
3,988,836	+		PS417_18295	0.24	+0.1
3,988,838	+		PS417_18295	0.24	+0.2
3,988,886	-		PS417_18295	0.28	-1.0
3,988,981	-		PS417_18295	0.35	-0.1
3,989,306	-		PS417_18295	0.58	-0.7