Strain Fitness in Pseudomonas simiae WCS417 around PS417_18285

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
3,983,158	+		PS417_18280	0.37	+0.7
3,983,159	-		PS417_18280	0.37	+0.4
3,983,342	+		PS417_18280	0.50	+1.0
3,983,343	-		PS417_18280	0.50	+0.1
3,983,416	-		PS417_18280	0.56	-1.7
3,983,437	-		PS417_18280	0.57	+1.6
3,983,574	+		PS417_18280	0.67	+0.2
3,983,575	-		PS417_18280	0.67	-0.4
3,983,575	-		PS417_18280	0.67	-0.1
3,983,632	-		PS417_18280	0.71	-0.4
3,983,658	+		PS417_18280	0.73	+0.6
3,983,890	+		PS417_18280	0.90	-0.6
3,984,151	-				-1.4
3,984,402	-		PS417_18285	0.12	-0.6
3,984,587	+		PS417_18285	0.18	-0.4
3,984,796	-		PS417_18285	0.24	-0.5
3,984,859	+		PS417_18285	0.26	-0.3
3,984,859	+		PS417_18285	0.26	+0.1
3,984,860	-				-1.0
3,984,864	-		PS417_18285	0.26	+0.3
3,984,902	-		PS417_18285	0.28	+0.7
3,984,905	+		PS417_18285	0.28	-0.3
3,984,905	+		PS417_18285	0.28	-0.4
3,984,905	+		PS417_18285	0.28	-0.7
3,984,905	+		PS417_18285	0.28	+0.3
3,984,906	-		PS417_18285	0.28	+0.0
3,984,906	-		PS417_18285	0.28	-0.6
3,984,952	-		PS417_18285	0.29	+0.8
3,985,331	-		PS417_18285	0.41	+0.4
3,985,379	+		PS417_18285	0.43	-0.3
3,985,379	+		PS417_18285	0.43	+0.7
3,985,379	+		PS417_18285	0.43	+0.8
3,985,380	-		PS417_18285	0.43	+0.5
3,985,380	-		PS417_18285	0.43	-1.7
3,985,536	-		PS417_18285	0.48	+0.4
3,985,767	-		PS417_18285	0.55	-0.9
3,985,801	-		PS417_18285	0.56	+0.3
3,985,801	-		PS417_18285	0.56	-0.1
3,985,806	+		PS417_18285	0.57	+0.2
3,985,990	-		PS417_18285	0.62	-0.6
3,986,220	-				+0.5
3,986,473	-		PS417_18285	0.78	-0.8
3,986,583	-		PS417_18285	0.81	+0.7
3,986,583	-		PS417_18285	0.81	+0.5
3,986,700	-		PS417_18285	0.85	-0.3
3,986,804	-		PS417_18285	0.88	+0.6
3,986,887	-				-1.0
3,986,937	+				-0.0
3,986,938	-				-0.8
3,986,938	-				-1.1
3,986,939	+				-0.3
3,986,939	+				+1.5
3,986,939	+				-0.2
3,986,939	+				-0.9
3,986,939	+				+0.3
3,986,940	-				+0.8
3,986,940	-				-0.1
3,986,940	-				-1.7
3,987,024	-				+0.2
3,987,057	+				+0.7
3,987,472	+		PS417_18290	0.25	-0.1
3,987,472	+		PS417_18290	0.25	+0.3
3,987,472	+		PS417_18290	0.25	+0.2
3,987,472	+		PS417_18290	0.25	+0.2
3,987,472	+		PS417_18290	0.25	-0.1
3,987,473	-		PS417_18290	0.25	+0.6
3,987,473	-		PS417_18290	0.25	-0.4
3,987,473	-		PS417_18290	0.25	+0.2
3,987,473	-		PS417_18290	0.25	-0.2
3,987,586	+		PS417_18290	0.35	-0.8
3,987,587	-		PS417_18290	0.35	-0.8
3,987,587	-		PS417_18290	0.35	-0.5
3,987,587	-		PS417_18290	0.35	-0.4
3,987,712	+				+3.0
3,987,822	-		PS417_18290	0.55	-0.2
3,987,822	-		PS417_18290	0.55	+0.4
3,988,069	+		PS417_18290	0.76	+0.2
3,988,069	+		PS417_18290	0.76	+1.0
3,988,069	+		PS417_18290	0.76	+0.4