Strain Fitness in Pseudomonas simiae WCS417 around PS417_18280

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
3,981,718	-				+0.1
3,981,772	-				-0.2
3,981,871	+				+1.5
3,981,871	+				+0.4
3,981,872	-				+0.2
3,981,911	+				+0.0
3,981,925	-				+1.0
3,981,932	+		PS417_18275	0.11	+0.8
3,982,009	-		PS417_18275	0.22	-0.2
3,982,011	+		PS417_18275	0.22	+0.9
3,982,119	-		PS417_18275	0.37	+0.2
3,982,332	+		PS417_18275	0.68	-0.6
3,982,333	-		PS417_18275	0.68	-1.3
3,982,333	-		PS417_18275	0.68	+1.6
3,982,400	+		PS417_18275	0.77	-0.1
3,982,400	+		PS417_18275	0.77	-1.0
3,982,400	+		PS417_18275	0.77	-0.2
3,982,400	+		PS417_18275	0.77	+0.3
3,982,401	-		PS417_18275	0.78	-0.1
3,982,401	-		PS417_18275	0.78	-0.1
3,982,404	+		PS417_18275	0.78	+0.4
3,982,411	+		PS417_18275	0.79	-0.4
3,982,440	+		PS417_18275	0.83	-0.0
3,982,671	+				+0.6
3,982,788	+		PS417_18280	0.10	+0.2
3,982,852	+		PS417_18280	0.15	-0.3
3,982,927	-		PS417_18280	0.20	+0.3
3,983,158	+		PS417_18280	0.37	+0.7
3,983,159	-		PS417_18280	0.37	+0.4
3,983,342	+		PS417_18280	0.50	+1.0
3,983,343	-		PS417_18280	0.50	+0.1
3,983,416	-		PS417_18280	0.56	-1.7
3,983,437	-		PS417_18280	0.57	+1.6
3,983,574	+		PS417_18280	0.67	+0.2
3,983,575	-		PS417_18280	0.67	-0.4
3,983,575	-		PS417_18280	0.67	-0.1
3,983,632	-		PS417_18280	0.71	-0.4
3,983,658	+		PS417_18280	0.73	+0.6
3,983,890	+		PS417_18280	0.90	-0.6
3,984,151	-				-1.4
3,984,402	-		PS417_18285	0.12	-0.6
3,984,587	+		PS417_18285	0.18	-0.4
3,984,796	-		PS417_18285	0.24	-0.5
3,984,859	+		PS417_18285	0.26	-0.3
3,984,859	+		PS417_18285	0.26	+0.1
3,984,860	-				-1.0
3,984,864	-		PS417_18285	0.26	+0.3
3,984,902	-		PS417_18285	0.28	+0.7
3,984,905	+		PS417_18285	0.28	-0.3
3,984,905	+		PS417_18285	0.28	-0.4
3,984,905	+		PS417_18285	0.28	-0.7
3,984,905	+		PS417_18285	0.28	+0.3
3,984,906	-		PS417_18285	0.28	+0.0
3,984,906	-		PS417_18285	0.28	-0.6
3,984,952	-		PS417_18285	0.29	+0.8