Strain Fitness in Pseudomonas simiae WCS417 around PS417_16810
Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,666,225 | + | PS417_16805 | 0.34 | +0.4 | |
3,666,398 | + | PS417_16805 | 0.47 | +0.1 | |
3,666,624 | + | PS417_16805 | 0.63 | -0.1 | |
3,666,625 | - | PS417_16805 | 0.63 | -0.3 | |
3,666,639 | + | PS417_16805 | 0.64 | -1.9 | |
3,666,934 | - | PS417_16805 | 0.86 | +1.2 | |
3,666,942 | + | PS417_16805 | 0.86 | -0.5 | |
3,666,943 | - | PS417_16805 | 0.86 | -0.9 | |
3,667,032 | + | -1.4 | |||
3,667,151 | + | -1.0 | |||
3,667,151 | + | +0.9 | |||
3,667,151 | + | -0.3 | |||
3,667,152 | - | -0.0 | |||
3,667,382 | + | PS417_16810 | 0.77 | -1.0 | |
3,667,383 | - | PS417_16810 | 0.78 | -0.7 | |
3,667,468 | + | +0.6 | |||
3,667,468 | + | -0.2 | |||
3,668,323 | + | PS417_16815 | 0.72 | -0.9 | |
3,668,453 | - | PS417_16815 | 0.82 | -0.2 |
Or see this region's nucleotide sequence