Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01600 and PS417_01605 are separated by 259 nucleotides PS417_01605 and PS417_01610 are separated by 151 nucleotides PS417_01610 and PS417_01615 are separated by 1 nucleotides PS417_01615 and PS417_01620 are separated by 41 nucleotides
PS417_01600: PS417_01600 - peptidase M23, at 352,199 to 353,494
_01600
PS417_01605: PS417_01605 - phosphoglycerate mutase, at 353,754 to 355,280
_01605
PS417_01610: PS417_01610 - sulfurtransferase, at 355,432 to 355,845
_01610
PS417_01615: PS417_01615 - glutaredoxin, at 355,847 to 356,101
_01615
PS417_01620: PS417_01620 - preprotein translocase subunit SecB, at 356,143 to 356,622
_01620
Position (kb) 353
354
355
356 Strain fitness (log2 ratio) -2
-1
0
1
2 at 353.067 kb on + strand, within PS417_01600 at 353.068 kb on - strand, within PS417_01600 at 353.074 kb on - strand, within PS417_01600 at 353.076 kb on + strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.401 kb on + strand at 353.494 kb on + strand at 353.527 kb on + strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.583 kb on + strand at 353.584 kb on - strand at 353.584 kb on - strand at 353.584 kb on - strand at 353.604 kb on - strand at 353.620 kb on + strand at 353.621 kb on - strand at 353.621 kb on - strand at 353.621 kb on - strand at 353.632 kb on + strand at 353.633 kb on - strand at 353.705 kb on + strand at 353.706 kb on - strand at 354.097 kb on + strand, within PS417_01605 at 354.098 kb on - strand, within PS417_01605 at 354.670 kb on + strand, within PS417_01605 at 355.048 kb on + strand, within PS417_01605 at 355.281 kb on - strand at 355.281 kb on - strand at 355.281 kb on - strand at 355.281 kb on - strand at 355.301 kb on + strand at 355.394 kb on + strand at 355.394 kb on + strand at 355.396 kb on + strand at 355.396 kb on + strand at 355.396 kb on + strand at 355.846 kb on + strand at 355.846 kb on + strand at 356.107 kb on - strand at 356.113 kb on + strand at 356.209 kb on + strand, within PS417_01620 at 356.209 kb on + strand, within PS417_01620
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.025 mg/ml remove 353,067 + PS417_01600 0.67 -0.6 353,068 - PS417_01600 0.67 +0.2 353,074 - PS417_01600 0.68 +0.4 353,076 + PS417_01600 0.68 -1.7 353,077 - PS417_01600 0.68 -0.1 353,077 - PS417_01600 0.68 +1.1 353,077 - PS417_01600 0.68 -2.2 353,401 + -2.0 353,494 + -2.6 353,527 + -0.2 353,528 - +2.1 353,528 - -0.3 353,528 - -0.5 353,528 - +1.1 353,531 - -0.9 353,531 - -0.3 353,531 - +1.5 353,531 - -0.6 353,583 + -0.6 353,584 - -2.3 353,584 - +2.1 353,584 - +0.1 353,604 - +0.3 353,620 + +0.7 353,621 - -0.7 353,621 - +1.1 353,621 - -0.4 353,632 + -0.5 353,633 - -2.6 353,705 + +0.2 353,706 - -0.4 354,097 + PS417_01605 0.22 -1.4 354,098 - PS417_01605 0.23 -0.9 354,670 + PS417_01605 0.60 +0.8 355,048 + PS417_01605 0.85 -0.2 355,281 - +0.7 355,281 - +0.9 355,281 - -0.2 355,281 - -0.1 355,301 + -1.1 355,394 + -0.6 355,394 + -0.3 355,396 + -0.1 355,396 + -1.3 355,396 + +0.9 355,846 + +0.0 355,846 + +0.5 356,107 - +0.4 356,113 + -0.2 356,209 + PS417_01620 0.14 +0.7 356,209 + PS417_01620 0.14 -0.3
Or see this region's nucleotide sequence