Experiment: Nalidixic 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12700 and PS417_12705 are separated by 22 nucleotides PS417_12705 and PS417_12710 are separated by 10 nucleotides
PS417_12700: PS417_12700 - ABC transporter for D-Mannitol and D-Sorbitol, ATPase component (from data) , at 2,763,597 to 2,764,700
_12700
PS417_12705: PS417_12705 - ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) , at 2,764,723 to 2,765,553
_12705
PS417_12710: PS417_12710 - ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) , at 2,765,564 to 2,766,457
_12710
Position (kb)
2764
2765
2766 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2764.037 kb on - strand, within PS417_12700 at 2764.037 kb on - strand, within PS417_12700 at 2764.136 kb on - strand at 2764.441 kb on + strand, within PS417_12700 at 2764.450 kb on + strand, within PS417_12700 at 2764.450 kb on + strand, within PS417_12700 at 2764.451 kb on - strand, within PS417_12700 at 2764.721 kb on + strand at 2764.724 kb on + strand at 2764.951 kb on + strand, within PS417_12705 at 2764.952 kb on - strand, within PS417_12705 at 2765.115 kb on - strand, within PS417_12705 at 2765.271 kb on - strand, within PS417_12705 at 2765.342 kb on + strand, within PS417_12705 at 2765.342 kb on + strand, within PS417_12705 at 2765.351 kb on + strand, within PS417_12705 at 2765.352 kb on - strand, within PS417_12705 at 2765.379 kb on - strand, within PS417_12705 at 2765.379 kb on - strand, within PS417_12705 at 2765.694 kb on + strand, within PS417_12710 at 2766.233 kb on - strand, within PS417_12710 at 2766.273 kb on + strand, within PS417_12710 at 2766.273 kb on + strand, within PS417_12710 at 2766.274 kb on - strand, within PS417_12710 at 2766.327 kb on + strand, within PS417_12710 at 2766.346 kb on - strand, within PS417_12710 at 2766.451 kb on + strand at 2766.451 kb on + strand at 2766.451 kb on + strand at 2766.478 kb on + strand at 2766.479 kb on - strand at 2766.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.025 mg/ml remove 2,764,037 - PS417_12700 0.40 +0.2 2,764,037 - PS417_12700 0.40 +0.4 2,764,136 - -0.8 2,764,441 + PS417_12700 0.76 -2.0 2,764,450 + PS417_12700 0.77 +0.1 2,764,450 + PS417_12700 0.77 +0.6 2,764,451 - PS417_12700 0.77 +0.6 2,764,721 + +0.3 2,764,724 + +0.1 2,764,951 + PS417_12705 0.27 +0.3 2,764,952 - PS417_12705 0.28 +2.1 2,765,115 - PS417_12705 0.47 +0.8 2,765,271 - PS417_12705 0.66 -0.2 2,765,342 + PS417_12705 0.74 +0.0 2,765,342 + PS417_12705 0.74 +0.2 2,765,351 + PS417_12705 0.76 +0.5 2,765,352 - PS417_12705 0.76 +2.8 2,765,379 - PS417_12705 0.79 +0.3 2,765,379 - PS417_12705 0.79 +0.2 2,765,694 + PS417_12710 0.15 +0.1 2,766,233 - PS417_12710 0.75 -0.3 2,766,273 + PS417_12710 0.79 -1.1 2,766,273 + PS417_12710 0.79 +0.4 2,766,274 - PS417_12710 0.79 +0.4 2,766,327 + PS417_12710 0.85 -1.4 2,766,346 - PS417_12710 0.87 -0.3 2,766,451 + +0.5 2,766,451 + -0.2 2,766,451 + +0.9 2,766,478 + +2.1 2,766,479 - +0.8 2,766,479 - -0.4
Or see this region's nucleotide sequence