Strain Fitness in Pseudomonas simiae WCS417 around PS417_12310

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
2,672,287	-				-0.2
2,672,616	+		PS417_12305	0.38	+0.3
2,672,750	+				-0.1
2,672,750	+				+0.0
2,672,750	+				-0.7
2,672,750	+				-0.6
2,672,750	+				+0.1
2,672,750	+				-0.6
2,672,750	+				-0.2
2,672,750	+				-0.7
2,672,750	+				-0.3
2,672,750	+				+0.1
2,672,751	-				-0.6
2,672,751	-				+0.2
2,672,751	-				+1.0
2,672,751	-				-1.7
2,672,751	-				+1.1
2,672,751	-				-1.3
2,672,786	-				+0.1
2,672,786	-				-0.0
2,672,786	-				-2.5
2,672,786	-				-0.2
2,672,804	+				-1.5
2,672,804	+				-0.7
2,672,804	+				-0.3
2,672,805	-				-0.9
2,672,805	-				+0.2
2,672,805	-				+0.3
2,672,819	+				+1.4
2,672,819	+				+0.8
2,672,820	-				+0.8
2,672,891	+				-1.7
2,672,933	+				-0.2
2,672,957	+				+1.4
2,672,958	-				-0.9
2,672,993	+				-1.3
2,673,334	-		PS417_12310	0.14	-0.4
2,673,624	+		PS417_12310	0.22	-0.2
2,673,625	-		PS417_12310	0.22	-0.5
2,673,758	+		PS417_12310	0.25	-0.5
2,673,803	+				+0.8
2,673,860	+		PS417_12310	0.28	+0.3
2,673,970	-		PS417_12310	0.31	-0.1
2,673,975	-		PS417_12310	0.31	-2.3
2,673,975	-		PS417_12310	0.31	-0.3
2,674,392	+		PS417_12310	0.42	-0.0
2,674,393	-		PS417_12310	0.42	-1.3
2,674,393	-		PS417_12310	0.42	-1.4
2,674,393	-		PS417_12310	0.42	-0.8
2,674,608	-		PS417_12310	0.48	-0.6
2,674,707	-		PS417_12310	0.51	-0.8
2,674,763	+		PS417_12310	0.52	-1.2
2,674,764	-		PS417_12310	0.52	-1.5
2,674,856	+		PS417_12310	0.55	-0.7
2,674,894	-		PS417_12310	0.56	-2.2
2,675,007	-		PS417_12310	0.59	-0.9
2,675,670	-				+0.8
2,676,205	+				-0.4
2,676,205	+				+0.1
2,676,206	-				+0.2
2,676,212	-				-0.8
2,676,474	+				-0.0
2,676,475	-				-0.4
2,676,516	+				-0.2
2,676,569	-				-0.3
2,676,613	+				-0.2
2,676,635	+				+0.0
2,676,646	-				-0.4
2,676,692	+				+0.2
2,676,693	-				-0.1
2,676,909	-				+0.2
2,676,953	+		PS417_12315	0.11	-0.5
2,676,953	+		PS417_12315	0.11	-0.0
2,676,954	-		PS417_12315	0.11	-0.8
2,677,220	+		PS417_12315	0.23	-0.3
2,677,397	+		PS417_12315	0.31	-0.1
2,677,397	+		PS417_12315	0.31	+1.8
2,677,517	+		PS417_12315	0.36	-0.7
2,677,517	+		PS417_12315	0.36	+1.1
2,677,517	+		PS417_12315	0.36	-0.1